BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12684 (UTR included)
(2110 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2E07 1384 0.0
BF01014B2D12 68 6e-11
>BF01047B2E07
Length = 718
Score = 1384 bits (698), Expect = 0.0
Identities = 713/718 (99%)
Strand = Plus / Plus
Query: 592 agaaggctttcgaggagaatgtggccagcagtttgaaaagtatgggtctgcaggtggaga 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaaggctttcgaggagaatgtggccagcagtttgaaaagtatgggtctgcaggtggaga 60
Query: 652 tggccagccgtttaacctacaacgacgagctaataaagtggtgtgacgtagtggtgccgt 711
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 tggccagccgtttaacctacaacgacgagttaataaagtggtgtgacgtagtggtgccgt 120
Query: 712 gcggtggtgacggaaccttcctactggcagcatcaagggtcagagacgccaccaaacccg 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggtggtgacggaaccttcctactggcagcatcaagggtcagagacgccaccaaacccg 180
Query: 772 ttataggcttcaacagcgctccacacaaatctgtcggtagactgtgtttacccacctggt 831
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 181 ttataggcttcaacagcgctccacacaaatctgtcggtaggctgtgtttacccacctggt 240
Query: 832 gttccaacgacgtgaaaggtgccttcacagccctaaaggagggtagatttagatggatgc 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttccaacgacgtgaaaggtgccttcacagccctaaaggagggtagatttagatggatgc 300
Query: 892 gtcgttccagaataaggacaaccataacctccgaacctaaacagctggaaacgataacac 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcgttccagaataaggacaaccataacctccgaacctaaacagctggaaacgataacac 360
Query: 952 ctgtagacctgcacaccatgaattattgcagatatcctcccgtaacgaatcctcacgata 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgtagacctgcacaccatgaattattgcagatatcctcccgtaacgaatcctcacgata 420
Query: 1012 attctgatactacgactgactataaagaggatagttgtacgttagcgaccaaagtgttgc 1071
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attctgatactaccacagactataaagaggatagttgtacgttagcgaccaaagtgttgc 480
Query: 1072 cattattggctttgaatgaggtgtttataggtgagagtgtgacgtcacgcgtgtccctcc 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cattattggctttgaatgaggtgtttataggtgagagtgtgacgtcacgcgtgtccctcc 540
Query: 1132 tcagactacaaattgacaacggacagtggacacacaccaagagctcggggctttgtgtca 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcagactacaaattgacaacggacagtggacacacaccaagagctcggggctttgtgtca 600
Query: 1192 caactggcacggggagtacatcctggcattacagcatcaactgtctccggacccattcag 1251
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 601 caactggcacggggagtacatcctggcattacagtatcaactgtctccggacccattcag 660
Query: 1252 tgctggagctgatgcagatactaaatgaggattttgatgtgaagatggatacaacgtt 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgctggagctgatgcagatactaaatgaggattttgatgtgaagatggatacaacgtt 718
>BF01014B2D12
Length = 734
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 131 tgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgagtgtg 184
|||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||
Sbjct: 142 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 89
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 131 tgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgagtgtg 184
|||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||
Sbjct: 144 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 91
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 131 tgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgagtgtg 184
|||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||
Sbjct: 146 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 93
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 131 tgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgagtgtg 184
|||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||
Sbjct: 148 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 95
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 131 tgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgagtgtg 184
|||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||
Sbjct: 150 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 97
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 131 tgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgagtgtg 184
|||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||
Sbjct: 152 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 99
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 131 tgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgagtgtg 184
|||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||
Sbjct: 154 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 101
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 131 tgtgtgtgtgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgagtgtg 184
|||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||
Sbjct: 156 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 103
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,887
Number of extensions: 24139
Number of successful extensions: 24139
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 24134
Number of HSP's successfully gapped: 9
Length of query: 2110
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2093
Effective length of database: 8,119,229
Effective search space: 16993546297
Effective search space used: 16993546297
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)