BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12689 (UTR included)
(1747 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 262 2e-69
BF14_2200_C1 74 8e-13
>BF14_729_C3
Length = 2041
Score = 262 bits (132), Expect = 2e-69
Identities = 236/270 (87%), Gaps = 4/270 (1%)
Strand = Plus / Plus
Query: 570 aaaccaggccattacattcggtttgttagaccacagatcctcgctcgtgaagacaggtac 629
||||||||||| |||||||| |||| || ||| || ||||||||||| ||||||| |||
Sbjct: 1278 aaaccaggccactacattcgttttgataaacctcaaatcctcgctcgggaagacaagtat 1337
Query: 630 ataccgaggttaatccacgaggctattgaaattaaaaaaaacgtccccatttcaatagag 689
|||||||| ||||| | |||||||||||||||||||||| | |||| ||||||||||||
Sbjct: 1338 ataccgagattaattcgcgaggctattgaaattaaaaaaca--tcccaatttcaatagag 1395
Query: 690 aagatg--tggaatctatccaacacctgggatcccctccttaaaaatataaaatcctatg 747
|||||| ||||||||||| ||||||||||| ||| | |||||||||||||||||| |||
Sbjct: 1396 aagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatcccatg 1455
Query: 748 tccgtgactacacagcaggacctcatgacaccgtaagcgcattctgccggcatccagagc 807
|||| || |||| ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1456 tccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggcatccagagc 1515
Query: 808 gatacgccagaaaattaagaaatcgatggc 837
| ||||||| |||||||||||||||||
Sbjct: 1516 ggtacgccannnnattaagaaatcgatggc 1545
>BF14_2200_C1
Length = 820
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 337 ctttggatattataaataggatgtaagtgctggactggtgattctgttacgagttgtgga 396
||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||
Sbjct: 664 ctttgaatattataaataggatgtaagtgctagacaatggattctgttaggagttgtgga 605
Query: 397 gaaataaacatct 409
|||||||||||
Sbjct: 604 ccaataaacatct 592
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 350,181
Number of extensions: 20200
Number of successful extensions: 20200
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 20197
Number of HSP's successfully gapped: 2
Length of query: 1747
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1730
Effective length of database: 8,119,229
Effective search space: 14046266170
Effective search space used: 14046266170
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)