BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12693 (UTR included)
(2872 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_98_C1 1144 0.0
>BF14_98_C1
Length = 2209
Score = 1144 bits (577), Expect = 0.0
Identities = 589/593 (99%)
Strand = Plus / Plus
Query: 1781 cgcgttcatcggcgccgacgtggtcgactggatcctgcagcacgtggccggcatagtgga 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcgttcatcggcgccgacgtggtcgactggatcctgcagcacgtggccggcatagtgga 60
Query: 1841 caggagggacgccaggaagtacgcctcgcacatgctcaaggctggcttcatccgtcacac 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caggagggacgccaggaagtacgcctcgcacatgctcaaggctggcttcatccgtcacac 120
Query: 1901 tgtgaataagatcacgttctccgagcagtgttactacgtggctggagagctctgtgccga 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 tgtgaataagatcacgttctccgagcagtgttactacgtggctggagagctctgtgctga 180
Query: 1961 tatggccgcgctcaggatacgcagcgccgaccaggacagcctggcctccgatacactagc 2020
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatggccgccctcaggatacgcagcgccgaccaggacagcctggcctccgatacactagc 240
Query: 2021 gcctctaccgaatcccaacataatgggtccgggctacatgccttacgctggctcctacgg 2080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcctctaccgaatcccaacataatgggtccgggctacatgccttacgctggctcctacgg 300
Query: 2081 ctaccagcccatacccttcaagtacagctcgtgcctcaccagcgagcacacggtgtacgg 2140
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctaccagccgatacccttcaagtacagctcgtgcctcaccagcgagcacacggtgtacgg 360
Query: 2141 atacaatcgcgaggagagcgtgttgtctgggagcggcgggtccagcgcgggctccgacca 2200
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 361 atacaatcgcgaggagagcgtgttgtctgggagcggcggctccagcgcgggctccgacca 420
Query: 2201 cctcactaccaaggaacccccgggtcctaaccgcgagaacgaggtgaagtctacctccag 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctcactaccaaggaacccccgggtcctaaccgcgagaacgaggtgaagtctacctccag 480
Query: 2261 cggttcaggtgccagtgctgcggcggagggcgggggcggaggcaccaggaggtcacactc 2320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggttcaggtgccagtgctgcggcggagggcgggggcggaggcaccaggaggtcacactc 540
Query: 2321 acactccagcggctcggagagagccaacgacaggcccgtgctcttcctgtagt 2373
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acactccagcggctcggagagagccaacgacaggcccgtgctcttcctgtagt 593
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,266
Number of extensions: 12008
Number of successful extensions: 12008
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12008
Number of HSP's successfully gapped: 1
Length of query: 2872
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2855
Effective length of database: 8,119,229
Effective search space: 23180398795
Effective search space used: 23180398795
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)