BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12697 (UTR included)
(1681 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B1H06 549 e-156
BF01013B2C03 303 5e-82
BF14_196_C2 274 4e-73
BF01009B2H03 111 4e-24
BF01039A2C03 84 8e-16
>BF01039B1H06
Length = 363
Score = 549 bits (277), Expect = e-156
Identities = 292/297 (98%)
Strand = Plus / Plus
Query: 1051 ccgacctcatatcagagtaccaacagtaccaggaggctaacgtggatgatgaagaggtag 1110
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 ccgacctcatctcagagtaccaacagtaccaggaggctaacgtggatgatgaagaggtag 92
Query: 1111 gcttcgacgaggaagaggaagaagacgatcaaaattacgaccacaaggagtcggtgcacg 1170
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gcttcgacgaggaagaggaggaagacgatcaaaattacgaccacaaggagtcggtgcacg 152
Query: 1171 tcccgctatagagacgccatcttgttttgtacacaacttgaattatctcccgcatttata 1230
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tcccgctatagaggcgccatcttgttttgtacacaacttgaattatctcccgcatttata 212
Query: 1231 aacttggtacttaattttaaatttttaatatcattaacttgcgcgttcaatgaatgttat 1290
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 213 aacttggtacttaattttaaatttttaatatcatttacttgcgcgttcaatggatgttat 272
Query: 1291 attttaaggttgtagatgtgaagcgaatgtttttacaataaaactatttgtgaaata 1347
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 attttaaggttgtagatgtgaagcgaatgtttttacaataaaactatttgtgaaata 329
>BF01013B2C03
Length = 831
Score = 303 bits (153), Expect = 5e-82
Identities = 333/393 (84%)
Strand = Plus / Plus
Query: 695 gaacatgatgacggcttgcgacccccgtcacggccgctacctcacagtggccaccgtgtt 754
|||||||||| | || |||||||| || ||||||||||||||||| |||||| || | ||
Sbjct: 341 gaacatgatggcagcctgcgaccctcgccacggccgctacctcaccgtggccgccatctt 400
Query: 755 cagaggtcacatgtccatgagagaggtcgacgaccaagtgttggcggtccagaacaagaa 814
| | |||| ||||||||||| ||||| ||||| || || | |||||||||||||
Sbjct: 401 ccgtggtcgcatgtccatgaaggaggtggacgagcagatgctcaacatccagaacaagaa 460
Query: 815 ctcgagctacttcgtggaatggatccccaacaacctgaaggtggccgtctgcgacgtccc 874
|||| ||||||||||||||||||||||||||| ||||| ||||| |||||| ||||
Sbjct: 461 ctcgtcgtacttcgtggaatggatccccaacaacgtgaagaccgccgtgtgcgacatccc 520
Query: 875 gccgcgcggcctcaagatgtccgccacgttcatcggcaactccaccgccatccaggagat 934
|||||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||| |
Sbjct: 521 tccgcgcggtctcaagatggccgccaccttcatcggcaactccaccgccatccaagagct 580
Query: 935 attcaaacgcatttcagaacagttcaccgccatgttcaggagaagagcgttcctccactg 994
||||| ||||| || || |||||||||||||||||||| | | || |||||||||||
Sbjct: 581 gttcaagcgcatctcggagcagttcaccgccatgttcagacgcaaggctttcctccactg 640
Query: 995 gtacacgggcgagggtatggacgagatggagttcacggaggcggccagcaacatggccga 1054
|||||| |||||||| |||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 641 gtacaccggcgagggaatggacgagatggagttcacggaggcggagagcaacatgaacga 700
Query: 1055 cctcatatcagagtaccaacagtaccaggaggc 1087
||| | || |||||||||||||||||||||||
Sbjct: 701 cctggtgtccgagtaccaacagtaccaggaggc 733
Score = 67.9 bits (34), Expect = 5e-11
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 501 atgtccggtgtcacgacttgcctccgtttccctggacaattgaatgctgatctcaggaag 560
|||||||||||||| || |||||| | ||||| || || ||||| || ||||| | |||
Sbjct: 147 atgtccggtgtcaccacctgcctcaggttccccggtcagttgaacgccgatcttcgcaag 206
Query: 561 ctggccgtcaacatggtgcccttcccgagactgcacttttttatgcccggcttcgctcct 620
|||||||||||||||| || ||||| | || ||||| || |||||||| |||||||||
Sbjct: 207 ttggccgtcaacatggttcctttcccccgtctccacttcttcatgcccggattcgctcct 266
Query: 621 ct 622
||
Sbjct: 267 ct 268
>BF14_196_C2
Length = 1961
Score = 274 bits (138), Expect = 4e-73
Identities = 327/390 (83%)
Strand = Plus / Plus
Query: 695 gaacatgatgacggcttgcgacccccgtcacggccgctacctcacagtggccaccgtgtt 754
|||||||||| | || |||||||| || ||||||||||||||||| |||||| || | ||
Sbjct: 933 gaacatgatggcagcctgcgaccctcgccacggccgctacctcaccgtggccgccatctt 992
Query: 755 cagaggtcacatgtccatgagagaggtcgacgaccaagtgttggcggtccagaacaagaa 814
| | |||| ||||||||||| ||||| ||||| || || | |||||||||||||
Sbjct: 993 ccgtggtcgcatgtccatgaaggaggtggacgagcagatgctcaacatccagaacaagaa 1052
Query: 815 ctcgagctacttcgtggaatggatccccaacaacctgaaggtggccgtctgcgacgtccc 874
|||| ||||||||||||||||||||||||||| ||||| ||||| |||||| ||||
Sbjct: 1053 ctcgtcgtacttcgtggaatggatccccaacaacgtgaagaccgccgtgtgcgacatccc 1112
Query: 875 gccgcgcggcctcaagatgtccgccacgttcatcggcaactccaccgccatccaggagat 934
|| ||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||| |
Sbjct: 1113 tccccgcggtctcaagatggccgccaccttcatcggcaactccaccgccatccaagagct 1172
Query: 935 attcaaacgcatttcagaacagttcaccgccatgttcaggagaagagcgttcctccactg 994
||||| ||||| || || ||||||||||| |||||||| | | || |||||||||||
Sbjct: 1173 gttcaagcgcatctcggagcagttcaccgctatgttcagacgcaaggctttcctccactg 1232
Query: 995 gtacacgggcgagggtatggacgagatggagttcacggaggcggccagcaacatggccga 1054
|||||| |||||||| |||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 1233 gtacaccggcgagggaatggacgagatggagttcacggaggcggagagcaacatgaacga 1292
Query: 1055 cctcatatcagagtaccaacagtaccagga 1084
||| | || |||||||| |||||||||||
Sbjct: 1293 cctggtgtccgagtaccagcagtaccagga 1322
>BF01009B2H03
Length = 316
Score = 111 bits (56), Expect = 4e-24
Identities = 170/208 (81%)
Strand = Plus / Plus
Query: 695 gaacatgatgacggcttgcgacccccgtcacggccgctacctcacagtggccaccgtgtt 754
|||||||||| | || |||||||| || ||||||||||||||||| |||||| || | ||
Sbjct: 102 gaacatgatggcagcctgcgaccctcgccacggccgctacctcaccgtggccgccatctt 161
Query: 755 cagaggtcacatgtccatgagagaggtcgacgaccaagtgttggcggtccagaacaagaa 814
| | |||| ||||||||||| ||||| ||||| || || | |||||||||||||
Sbjct: 162 ccgtggtcgcatgtccatgaaggaggtggacgagcagatgctcaacatccagaacaagaa 221
Query: 815 ctcgagctacttcgtggaatggatccccaacaacctgaaggtggccgtctgcgacgtccc 874
|||| ||||||||||||||||||||||||||| ||||| ||||| |||||| ||||
Sbjct: 222 ctcgtcgtacttcgtggaatggatccccaacaacgtgaagaccgccgtgtgcgacatccc 281
Query: 875 gccgcgcggcctcaagatgtccgccacg 902
|| ||||| ||||||||| | ||||||
Sbjct: 282 tccccgcggtctcaagatggcggccacg 309
>BF01039A2C03
Length = 818
Score = 83.8 bits (42), Expect = 8e-16
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 309 aatactgaaacattttaattttataatggcaacatttgagtatcagctcgtattcgaaaa 368
||||||| | |||| ||||||| ||| |||||||||| ||||| | || ||||| |||||
Sbjct: 155 aatactgtaccattgtaattttgtaagggcaacatttaagtatgaacttgtatttgaaaa 214
Query: 369 ctgtaaatactgggttcggccattttgtgggacattactgaaagtaacgctgaactttaa 428
|| ||||||||| | |||||||||| ||||||||||| ||| || ||||||| ||||
Sbjct: 215 ctataaatactgaccttagccattttgtaggacattactggaagaaatgctgaacattaa 274
Query: 429 aaatcaagac 438
|||| |||||
Sbjct: 275 aaatgaagac 284
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 232,311
Number of extensions: 10531
Number of successful extensions: 10531
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 10529
Number of HSP's successfully gapped: 6
Length of query: 1681
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1664
Effective length of database: 8,119,229
Effective search space: 13510397056
Effective search space used: 13510397056
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)