BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12707 (UTR included)
(1817 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A2C08 402 e-112
>BF01056A2C08
Length = 829
Score = 402 bits (203), Expect = e-112
Identities = 210/211 (99%), Gaps = 1/211 (0%)
Strand = Plus / Plus
Query: 765 gaaggcaatgacttcaagaaatggataccggaagctgttcaatcgaattgcggcaaatgt 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gaaggcaatgacttcaagaaatggataccggaagctgttcaatcgaattgcggcaaatgt 72
Query: 825 tccgaccaccagaagcatctcgtcggaaaggttatcaaagcctgcatagacaaacttcca 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tccgaccaccagaagcatctcgtcggaaaggttatcaaagcctgcatagacaaacttcca 132
Query: 885 gaagaatggaataaactaaacgccatccacaatccagatggaaaatacgacgaaaaactt 944
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 133 gaagaatggaataaactaaacgccatccacaatccagatggaaaatacgacg-aaaactt 191
Query: 945 aaagatctacctggaaaaatacggaaattaa 975
|||||||||||||||||||||||||||||||
Sbjct: 192 aaagatctacctggaaaaatacggaaattaa 222
Score = 250 bits (126), Expect = 7e-66
Identities = 162/174 (93%)
Strand = Plus / Plus
Query: 1143 gaaggcagcgacttcaaagaatggataccggaagctgtacaatcgaattgcggcaaatgt 1202
||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 13 gaaggcaatgacttcaagaaatggataccggaagctgttcaatcgaattgcggcaaatgt 72
Query: 1203 tccgacaatcagaagcatctcgtcggaaaggttatcaaagcctgcatggaaaaacttcca 1262
|||||| | |||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 73 tccgaccaccagaagcatctcgtcggaaaggttatcaaagcctgcatagacaaacttcca 132
Query: 1263 gaagaatggaaaaaactgaacgccctccacaatccagatggaaaatacgacgaa 1316
||||||||||| ||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 133 gaagaatggaataaactaaacgccatccacaatccagatggaaaatacgacgaa 186
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,165
Number of extensions: 7208
Number of successful extensions: 7208
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7207
Number of HSP's successfully gapped: 2
Length of query: 1817
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1800
Effective length of database: 8,119,229
Effective search space: 14614612200
Effective search space used: 14614612200
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)