BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12710 (UTR included)
(2338 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3359_C1 1499 0.0
>BF14_3359_C1
Length = 1103
Score = 1499 bits (756), Expect = 0.0
Identities = 820/836 (98%), Gaps = 4/836 (0%)
Strand = Plus / Plus
Query: 1506 ggatttcgaaaaatggcacttaaatatgcaggttttggactaaaggaaatgtcgagatcc 1565
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ggatttcgaaaaatggcacttaaatatgcaggttttggacttaaggaaatgtcgagatcc 60
Query: 1566 ttaatgacaccactgcaagtgatgcaattgcagaagtacattcaagatattactactaag 1625
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaatgacacctctgcaagtgatgcaattgcagaagtacattcaagatattactactaag 120
Query: 1626 gatgtggagtcaggtccggcaggagtacgagctcaggctatggggaaagatggcactcta 1685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgtggagtcaggtccggcaggagtacgagctcaggctatggggaaagatggcactcta 180
Query: 1686 atagaggactttgtgttcgactccaaacctggttcgggagcgataggaagtagagtctta 1745
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 181 atagaggactttgtgttcgactccaaacctggttcgggggcgataggaagtagagtctta 240
Query: 1746 cattgcagaaacgccccctctcctggcgctacatcatctttggctattgctaaaatgata 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cattgcagaaacgccccctctcctggcgctacatcatctttggctattgctaaaatgata 300
Query: 1806 gctgacaaaatgaaacaagagtttaaactataagaccttatttataagcaattaaaaaaa 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 301 gctgacaaaatgaaacaagagtttaaactataagaccttatttataagcaatttaaaaaa 360
Query: 1866 ttattgccaacaacttatacaactattggaagttttgcgtattcttatatagttctatat 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttattgccaacaacttatacaactattggaagttttgcgtattcttatatagttctatat 420
Query: 1926 ttatttattc-ttttttttttaaactactcaaatgcattcaacaaatacatttttgtttc 1984
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttatttattctttttttttttaaactactcaaatgcattcaacaaatacatttttgtttc 480
Query: 1985 aggctgttacaataatgtacagtattttgcttcttttattctaccttttttttggtatgt 2044
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 aggctgttacaataatgtacagtattttgcttcttttattctacc-tttttttggtatgt 539
Query: 2045 gcaactttttttta-gtattgctaataatatgttataaaatcccataagccagctaggct 2103
|||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 540 gcaacttttttttacatattgctaataatatcttataaaatcccataagccaagtaggct 599
Query: 2104 gcacatgaactgcataatgagttacaagcccactatttgtgataatattgtagagtgtgt 2163
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 600 gcacatgaactgcataatgagttacaagcccactatttgtgataatattgtagagggtgt 659
Query: 2164 taccaatatttactatagttataatttctcaactgacaacacttaagtcaattcattcag 2223
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 660 taccaatatttactatagttataatttctcaacggacaacacttaagtcaattcattcag 719
Query: 2224 ataatttatatttgttaata-tttttataagatgttttgtgacaatttccatttctatgt 2282
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 720 ataatttatatttgttaatattttttataagatgttttgggacaatttccatttctatgt 779
Query: 2283 cattaagatttaatctgtaaataagcggttgttaaattctattcataacccagatt 2338
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 780 cattaagatttaatctgtaaataagcgggtgttaaattctattcataacccagatt 835
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 376,722
Number of extensions: 8965
Number of successful extensions: 8965
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8961
Number of HSP's successfully gapped: 1
Length of query: 2338
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2321
Effective length of database: 8,119,229
Effective search space: 18844730509
Effective search space used: 18844730509
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)