BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12723 (UTR included)
(1990 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A1G01 1443 0.0
>BF01010A1G01
Length = 824
Score = 1443 bits (728), Expect = 0.0
Identities = 737/740 (99%)
Strand = Plus / Plus
Query: 569 aaaagcagagtttgtggatatgactctagttgctgggggtcatttagttaaagttcataa 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aaaagcagagtttgtggatatgactctagttgctgggggtcatttagttaaagttcataa 144
Query: 629 gaatattgtagctctggcaagcccttatataaagcacatgatacaatcagcaccatgtga 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gaatattgtagctctggcaagcccttatataaagcacatgatacaatcagcaccatgtga 204
Query: 689 acatcctgttatatttttaagtagtatcactcatgagattctctcatatattttagaata 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 acatcctgttatatttttaagtagtatcactcatgagattctctcatatattttagaata 264
Query: 749 tatatacactggtgaagtaaatgtagaagtagataaaatcaaatcttttataaatgcagc 808
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatatacactggtgaagttaatgtagaagtagataaaatcaaatcttttataaatgcagc 324
Query: 809 cacagagcttcatatcactggcatcagtaatgacttgccacttgggactactgaacaaat 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacagagcttcatatcactggcatcagtaatgacttgccacttgggactactgaacaaat 384
Query: 869 tagctctacactagacaaatccaagaagacagaggaagtcaggtctgattgtgcagcaaa 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 tagctctacactagacaaatccaagaagacagaggaagtcaggtctgattgtgcagcgaa 444
Query: 929 caacaataataaaaaggatttacccacaatcgatctgagttttaatgaaaacggttttgt 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 445 caacaataataaaaaggatttacccacaatcgatctgagttttaatgaaaacggtgttgt 504
Query: 989 caatcaactggagacaaatgcaaacagttttagtgaatggttacaagatacagactcaca 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caatcaactggagacaaatgcaaacagttttagtgaatggttacaagatacagactcaca 564
Query: 1049 gaatgcaaattttgaatgcaatcatttagaaaagacagatctattaaacagtgttaatct 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaatgcaaattttgaatgcaatcatttagaaaagacagatctattaaacagtgttaatct 624
Query: 1109 ggaacaaatatcccaaccaacatccaaagttgaaattaatataaatggatccattcctca 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggaacaaatatcccaaccaacatccaaagttgaaattaatataaatggatccattcctca 684
Query: 1169 acaatacaccgtgtccaagagagggtctttgcaattaattctaaatcggttcatgtattg 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acaatacaccgtgtccaagagagggtctttgcaattaattctaaatcggttcatgtattg 744
Query: 1229 tatgcatcatcagtctttgggtggaaaaaagagaaggtggagatgcatagactatcgtct 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tatgcatcatcagtctttgggtggaaaaaagagaaggtggagatgcatagactatcgtct 804
Query: 1289 gttacattgtccagcgtaca 1308
||||||||||||||||||||
Sbjct: 805 gttacattgtccagcgtaca 824
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 325,504
Number of extensions: 7663
Number of successful extensions: 7663
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7663
Number of HSP's successfully gapped: 1
Length of query: 1990
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1973
Effective length of database: 8,119,229
Effective search space: 16019238817
Effective search space used: 16019238817
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)