BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12727 (UTR included)
(2398 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A2D04 894 0.0
BF01005A2A08 355 2e-97
BF01044A1A04 222 2e-57
>BF01043A2D04
Length = 806
Score = 894 bits (451), Expect = 0.0
Identities = 599/648 (92%), Gaps = 19/648 (2%)
Strand = Plus / Plus
Query: 745 gagtaaaaagctggcccccgcttcctcccaaaccctggtcacatgtcctagatgctgcag 804
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |
Sbjct: 66 gagtaaaaagctggcccccacttcctcccaaaccctggtcatatgtcctagatgctgcgg 125
Query: 805 aacacggagctacttgcccacaatgggatatggtagctttgaaatttagaaaaggggaag 864
|||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 126 aacatggagctacacgcccacaatgggatatggtggctttgaaatttagaaaaggggaag 185
Query: 865 agaactgtttattcattaatgtttacactcccaccttacaaactgactccaaattacccg 924
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 186 agaactgtttattcattaatgtttacactcccaccttacaaactgactccaaattacctg 245
Query: 925 tgatggtgtatatccacgagggaggctttcaatcgggatctggaaatgaaagaatgtatg 984
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 246 tgatggtgtatatcccaaagggaggctttcaattgggatctggaaatgaaagaatgtatg 305
Query: 985 gcccaaattttctgataaggcatgatgttattcttgtaacgtttaattatagattggaac 1044
||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
Sbjct: 306 gcctaaattttctgataaggcatgatgttattcttgttttgtttaattgtagattggatc 365
Query: 1045 tattagggcttttatgtcttgacacccctgaagttcctggcaacgcaggtatgaaagata 1104
|||| ||| |||| |||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 366 tatt-gggatttt-tgtcttgaca-ccctgaagttcctggcaacgcaggtatgaaaaata 422
Query: 1105 tggtagcagccctgagatgggttcaaaataatattaaacagttcgggggtgacccagata 1164
||||||||| ||||||||||||||||||||| | |||| ||||||
Sbjct: 423 tggtagcagtcctgagatgggttcaaaataacactaaa----------------cagata 466
Query: 1165 atgtaacgatttttggagaaagtggtggagcagtttcagtgacttatcttatgctatctc 1224
|| ||| |||| ||| || |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 467 atttaatgattattgaagtaagtggtggagcagtttcagtgacctatcttatgctatctc 526
Query: 1225 cgatggctcaaggcttgtttcataaagctattgcacaaagtggatcatgtcttgccgatt 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 cgatggctcaaggcttgtttcataaagctattgcacaaagtggatcatgtcttgccgatt 586
Query: 1285 atgcaatagatgttaatcctgtacagagagcttttcgagttggaaaggtccttgggaagg 1344
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 587 atgcaatagatgttaatcctgtacagagagcttttcgagttgggaaggtccttgggaagg 646
Query: 1345 atacgacagatccttatgagttactcacatatttacaaagcttgcctg 1392
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 atacgacagatccttatgagttactcacatatttacaaagcttgcctg 694
>BF01005A2A08
Length = 332
Score = 355 bits (179), Expect = 2e-97
Identities = 234/258 (90%)
Strand = Plus / Plus
Query: 1392 gatgtacactttgtggtggcagcttacagatacgccagttgctattctaaatatagcagt 1451
|||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 75 gatgtacactttgtggtggcagcttacagatannccagttgctattctaagtataacagg 134
Query: 1452 cccgtttacatgtatagatttaatttagtaacagaattgaattggatacagcagatgctc 1511
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 135 cccgtttacatgtatagatttaatttactaacagaattgaattggatacannncatgctc 194
Query: 1512 ggaatgaccgaacacaaaggtgcctgccattttgatgacgtgttttatatatttagtaat 1571
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 195 ggaatgaccgaacacannnntgcctgccattttgatgacgtgttttatatatttagnnan 254
Query: 1572 ggaatgaatagagagaaatatgaaaatagtcccattctacaagaacatatccacagaatt 1631
|| ||||||||| |||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 255 ggnntgaatagagnnnaatatgaaaatagtcccattctacaagaacatatccgcagcatt 314
Query: 1632 accaaaatgtggaccgac 1649
||||||||||||||||||
Sbjct: 315 accaaaatgtggaccgac 332
>BF01044A1A04
Length = 819
Score = 222 bits (112), Expect = 2e-57
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 1392 gatgtacactttgtggtggcagcttacagatacgccagttgctattctaaatatagcagt 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gatgtacactttgtggtggcagcttacagatacgccagttgctattctaaatatagcagt 744
Query: 1452 cccgtttacatgtatagatttaatttagtaacagaattgaattggatacagc 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cccgtttacatgtatagatttaatttagtaacagaattgaattggatacagc 796
Score = 83.8 bits (42), Expect = 1e-15
Identities = 213/270 (78%)
Strand = Plus / Plus
Query: 1116 ctgagatgggttcaaaataatattaaacagttcgggggtgacccagataatgtaacgatt 1175
|||| |||||||||||||||||||||||| || || || ||||| | ||||| || |||
Sbjct: 13 ctgaaatgggttcaaaataatattaaacaatttggtggggaccctggcaatgtgacaatt 72
Query: 1176 tttggagaaagtggtggagcagtttcagtgacttatcttatgctatctccgatggctcaa 1235
||||||||||||| || | || ||| |||||||||| ||| | || || ||| || ||
Sbjct: 73 tttggagaaagtgcaggtggagcttcggtgacttatcacatgatgtcacctatgactaaa 132
Query: 1236 ggcttgtttcataaagctattgcacaaagtggatcatgtcttgccgattatgcaatagat 1295
|||||||| |||||||| || ||||| ||||| ||||| | |||||||| |||||
Sbjct: 133 ggcttgttccataaagcaatagcacagagtggcacatgtttgtgtgattatgctttagat 192
Query: 1296 gttaatcctgtacagagagcttttcgagttggaaaggtccttgggaaggatacgacagat 1355
| |||||||| | ||||| || ||||||||||| |||| ||||| || ||| | ||
Sbjct: 193 aatgatcctgtaaacagagccttcagagttggaaagttcctagggaaagacacggaaaat 252
Query: 1356 ccttatgagttactcacatatttacaaagc 1385
|| |||||||| | || ||||||||||||
Sbjct: 253 cccaatgagttattgacttatttacaaagc 282
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 307,870
Number of extensions: 6077
Number of successful extensions: 6077
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6075
Number of HSP's successfully gapped: 5
Length of query: 2398
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2381
Effective length of database: 8,119,229
Effective search space: 19331884249
Effective search space used: 19331884249
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)