BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12728 (UTR included)
(1471 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A2D04 454 e-127
BF01016B1A11 125 2e-28
BF01018B2A11 100 1e-20
BF01054B2B08 94 8e-19
BF01030A2C06 92 3e-18
BF01056B1D01 90 1e-17
BF01011A1B08 86 2e-16
BF01044A1A04 84 7e-16
BF14_736_C1 82 3e-15
BF01052B2H04 72 3e-12
BF01031B1D09 68 4e-11
>BF01043A2D04
Length = 806
Score = 454 bits (229), Expect = e-127
Identities = 306/334 (91%), Gaps = 17/334 (5%)
Strand = Plus / Plus
Query: 964 tgtcttgacacccctgaagttcctggcaacgcaggtatgaaagatatggtagcagccctg 1023
||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 378 tgtcttgacaccc-tgaagttcctggcaacgcaggtatgaaaaatatggtagcagtcctg 436
Query: 1024 agatgggttcaaaataatattaaacagttcgggggtgacccagataatgtaacgattttt 1083
||||||||||||||||| | ||||||| ||||| ||| |||| ||
Sbjct: 437 agatgggttcaaaataacactaaacag----------------ataatttaatgattatt 480
Query: 1084 ggagaaagtggtggagcagtttcagtgacttatcttatgctatctccgatggctcaaggc 1143
| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 481 gaagtaagtggtggagcagtttcagtgacctatcttatgctatctccgatggctcaaggc 540
Query: 1144 ttgtttcataaagctattgcacaaagtggatcatgtcttgccgattatgcaatagatgtt 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgtttcataaagctattgcacaaagtggatcatgtcttgccgattatgcaatagatgtt 600
Query: 1204 aatcctgtacagagagcttttcgagttggaaaggtccttgggaaggatacgacagatcct 1263
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 601 aatcctgtacagagagcttttcgagttgggaaggtccttgggaaggatacgacagatcct 660
Query: 1264 tatgagttactcacatatttacaaagcttgcctg 1297
||||||||||||||||||||||||||||||||||
Sbjct: 661 tatgagttactcacatatttacaaagcttgcctg 694
Score = 343 bits (173), Expect = 5e-94
Identities = 209/221 (94%)
Strand = Plus / Plus
Query: 736 ccccgcttcctcccaaaccctggtcgcatgtcctagatgctgcagaacacggagctactt 795
|||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 81 ccccacttcctcccaaaccctggtcatatgtcctagatgctgcggaacatggagctacac 140
Query: 796 gcccacaatgggatatggtggctttgaaatttagaaaaggggaagagaactgtttattca 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gcccacaatgggatatggtggctttgaaatttagaaaaggggaagagaactgtttattca 200
Query: 856 ttaatgtttacactcccaccttacaaactgactccaaattacctgtgatggtgtatatcc 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatgtttacactcccaccttacaaactgactccaaattacctgtgatggtgtatatcc 260
Query: 916 acgagggaggctttcaatcaggatctggaaatgaaagaatg 956
||||||||||||||| |||||||||||||||||||||
Sbjct: 261 caaagggaggctttcaattgggatctggaaatgaaagaatg 301
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1428 gttagatataatgttatctggaaaatataatcctgttcctctta 1471
|||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 694 gttagatacaatgttatctggaaaatttaatcctgttcctctta 737
>BF01016B1A11
Length = 786
Score = 125 bits (63), Expect = 2e-28
Identities = 114/131 (87%)
Strand = Plus / Minus
Query: 158 tttttaaatcatttaaatcgggcataccatttgaaagttatcacaatataagtttaataa 217
||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| |||
Sbjct: 158 tttttaaatcatttaaatcaggcgtaccatttgaaagttatcattatataagtttagtaa 99
Query: 218 ttctcaaaattaaataggttgtcttatattttttgtgacgggcccgcgcgaagcatgggc 277
|||||||||||||||||| | | ||||||||||| | | | ||||| ||||||| ||||
Sbjct: 98 ttctcaaaattaaataggctattttatattttttctaaagtgcccgtgcgaagccggggc 39
Query: 278 tgtcacctagt 288
|| |||||||
Sbjct: 38 tggtacctagt 28
>BF01018B2A11
Length = 733
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 158 tttttaaatcatttaaatcgggcataccatttgaaagttatcacaatataagtttaataa 217
||||||||||||||||||||||| |||| |||||||| ||||| ||||||| ||||| ||
Sbjct: 502 tttttaaatcatttaaatcgggcgtaccgtttgaaaggtatcataatataaatttaaaaa 443
Query: 218 ttctcaaaattaaatagg 235
| ||||||||||||||||
Sbjct: 442 tgctcaaaattaaatagg 425
>BF01054B2B08
Length = 807
Score = 93.7 bits (47), Expect = 8e-19
Identities = 84/95 (88%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 474 cagtcattaacgactgcgtttcgtccgatgagtgagagagccggttgccctttccctatt 533
||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 673 cagtctttaatggctgcgtttcgttcgatgagtgagagagccggttgccctttccctgtt 732
Query: 534 ccccatcctttcctgcaatctccatattcctaccc 568
|||| |||||||||| ||||| |||||| ||||
Sbjct: 733 -cccaccctttcctgccatctctttattcccaccc 766
>BF01030A2C06
Length = 599
Score = 91.7 bits (46), Expect = 3e-18
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Minus
Query: 158 tttttaaatcatttaaatcgggcataccatttgaaagttatcacaatataagtttaa--- 214
||||||||||||||||||| ||| ||||||||| ||||||||| |||||||||||||
Sbjct: 96 tttttaaatcatttaaatcaggcgtaccatttgcaagttatcataatataagtttaataa 37
Query: 215 taattctcaaaattaaataggttgtcttatattttt 250
|||| |||||||||||| ||| | | ||||||||||
Sbjct: 36 taatcctcaaaattaaaaaggctattttatattttt 1
>BF01056B1D01
Length = 838
Score = 89.7 bits (45), Expect = 1e-17
Identities = 86/99 (86%), Gaps = 3/99 (3%)
Strand = Plus / Minus
Query: 158 tttttaaatcatttaaatcgggcataccatttgaaagttatcacaatataagt---ttaa 214
|||||||||||||||| || ||| ||||||||| ||||||||| ||||||||| |||
Sbjct: 414 tttttaaatcatttaagtcaggcgtaccatttgcaagttatcataatataagtctaataa 355
Query: 215 taattctcaaaattaaataggttgtcttatattttttgt 253
||||||||||||||||| ||| | | |||||||||||||
Sbjct: 354 taattctcaaaattaaaaaggctattttatattttttgt 316
>BF01011A1B08
Length = 853
Score = 85.7 bits (43), Expect = 2e-16
Identities = 74/84 (88%), Gaps = 4/84 (4%)
Strand = Plus / Minus
Query: 453 agaagatcggcgtgaagtagtcagtcattaacgactgcgtttcgtccgatgagtgagaga 512
||||||||||||||||||||||| |||| |||||||||||||| ||||| ||||| |
Sbjct: 100 agaagatcggcgtgaagtagtca----ttaatgactgcgtttcgtctgatgaatgagaaa 45
Query: 513 gccggttgccctttccctattccc 536
|||| ||||||||||||| |||||
Sbjct: 44 gccgtttgccctttcccttttccc 21
>BF01044A1A04
Length = 819
Score = 83.8 bits (42), Expect = 7e-16
Identities = 213/270 (78%)
Strand = Plus / Plus
Query: 1021 ctgagatgggttcaaaataatattaaacagttcgggggtgacccagataatgtaacgatt 1080
|||| |||||||||||||||||||||||| || || || ||||| | ||||| || |||
Sbjct: 13 ctgaaatgggttcaaaataatattaaacaatttggtggggaccctggcaatgtgacaatt 72
Query: 1081 tttggagaaagtggtggagcagtttcagtgacttatcttatgctatctccgatggctcaa 1140
||||||||||||| || | || ||| |||||||||| ||| | || || ||| || ||
Sbjct: 73 tttggagaaagtgcaggtggagcttcggtgacttatcacatgatgtcacctatgactaaa 132
Query: 1141 ggcttgtttcataaagctattgcacaaagtggatcatgtcttgccgattatgcaatagat 1200
|||||||| |||||||| || ||||| ||||| ||||| | |||||||| |||||
Sbjct: 133 ggcttgttccataaagcaatagcacagagtggcacatgtttgtgtgattatgctttagat 192
Query: 1201 gttaatcctgtacagagagcttttcgagttggaaaggtccttgggaaggatacgacagat 1260
| |||||||| | ||||| || ||||||||||| |||| ||||| || ||| | ||
Sbjct: 193 aatgatcctgtaaacagagccttcagagttggaaagttcctagggaaagacacggaaaat 252
Query: 1261 ccttatgagttactcacatatttacaaagc 1290
|| |||||||| | || ||||||||||||
Sbjct: 253 cccaatgagttattgacttatttacaaagc 282
>BF14_736_C1
Length = 796
Score = 81.8 bits (41), Expect = 3e-15
Identities = 121/150 (80%), Gaps = 17/150 (11%)
Strand = Plus / Plus
Query: 392 tagagcctagctttggtcaaggagctacagctcgaacatgggctgactcgaccgggatag 451
|||||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||
Sbjct: 588 tagagcctagctgtggtcaagttactacagctcgaacatgggctggctcgaccggggaag 647
Query: 452 ta-------------gaagatcggcgtgaagtagtcagtcattaacgactgcgtttcgtc 498
|| ||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 648 taccaccctctcacagaagatcggcgtgaagtagtct----ttagtggctgcgtttcgtc 703
Query: 499 cgatgagtgagagagccggttgccctttcc 528
| ||||||||||||||||||||||||||||
Sbjct: 704 caatgagtgagagagccggttgccctttcc 733
>BF01052B2H04
Length = 668
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 493 ttcgtccgatgagtgagagagccggttgccctttccctattccc 536
|||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 360 ttcgtccgatgagtcagagaaccggttgccctttccctattccc 317
>BF01031B1D09
Length = 754
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 487 ctgcgtttcgtccgatgagtgagagagccggttgccctttccctattccc 536
||||||||||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 578 ctgcgtttcgtccgacgagtgagagagccggcggccctttcccttttccc 627
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 156,293
Number of extensions: 3428
Number of successful extensions: 3428
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 3424
Number of HSP's successfully gapped: 15
Length of query: 1471
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1454
Effective length of database: 8,119,229
Effective search space: 11805358966
Effective search space used: 11805358966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)