BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12730 (UTR included)
(2686 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A1A04 1522 0.0
BF01005A2A08 462 e-129
>BF01044A1A04
Length = 819
Score = 1522 bits (768), Expect = 0.0
Identities = 789/796 (99%)
Strand = Plus / Plus
Query: 1047 caagtggccgctctgaaatgggttcaaaataatattaaacaatttggtggcgaccctggc 1106
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 caagtggccgctctgaaatgggttcaaaataatattaaacaatttggtggggaccctggc 60
Query: 1107 aatgtgacaatttttggagaaagtgcaggtggagcttcggtgacttatcacatgatgtca 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgtgacaatttttggagaaagtgcaggtggagcttcggtgacttatcacatgatgtca 120
Query: 1167 ccaatgactaaaggcttgttccataaagcaatagcacagagtggcacatgtttgtgtgat 1226
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctatgactaaaggcttgttccataaagcaatagcacagagtggcacatgtttgtgtgat 180
Query: 1227 tatgctttagataatgatcctgtaaacagagccttcagagttggaaagttccttgggaaa 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 tatgctttagataatgatcctgtaaacagagccttcagagttggaaagttcctagggaaa 240
Query: 1287 gacacggaaaatcccaatgagttattgacttatttacaaagcctaccctcaaaaaagtta 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacacggaaaatcccaatgagttattgacttatttacaaagcctaccctcaaaaaagtta 300
Query: 1347 atatcactgacaatgaaaactgcgactaaggaggagaagtcaagaggtttacccataaag 1406
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301 atatcactgacaatgaaaactgcaactaaggaggagaagtcaagaggtttacccataaag 360
Query: 1407 tttgctccggttgttgaaaaaagatttggtgacagtgaagcctttttaccagagaatccc 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttgctccggttgttgaaaaaagatttggtgacagtgaagcctttttaccagagaatccc 420
Query: 1467 ctggatattcttatagctggtaaaatgcatgctgtacccttcatgaccggatataactca 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 421 ctggatattcttatagctggtaaaatgcatgctgtacccttcatgaccggatacaactca 480
Query: 1527 tcagaagggttcttaatagttcccaatgagttgccaaaattagcttacatcaataagcac 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcagaagggttcttaatagttcccaatgagttgccaaaattagcttacatcaataagcac 540
Query: 1587 ccgtcctgtttagttccaaaagatatttataataaagtatcagaagctaaggttttggaa 1646
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 541 ccgtcctgtttagttccaaaagatatttataataaagtatcagaagctaaggctttggaa 600
Query: 1647 ttcggtgagaggattaaacagttctattggggtgacagggatttgacaaaagatgacatc 1706
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcggcgagaggattaaacagttctattggggtgacagggatttgacaaaagatgacatc 660
Query: 1707 gaaatccttacagacgtactgtcagatgtacactttgtggtggcagcttacagatacgcc 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaaatccttacagacgtactgtcagatgtacactttgtggtggcagcttacagatacgcc 720
Query: 1767 agttgctattctaaatatagcagtcccgtttacatgtatagatttaatttagtaacagaa 1826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agttgctattctaaatatagcagtcccgtttacatgtatagatttaatttagtaacagaa 780
Query: 1827 ttgaattggatacagc 1842
||||||||||||||||
Sbjct: 781 ttgaattggatacagc 796
>BF01005A2A08
Length = 332
Score = 462 bits (233), Expect = e-129
Identities = 303/332 (91%)
Strand = Plus / Plus
Query: 1657 ggattaaacagttctattggggtgacagggatttgacaaaagatgacatcgaaatcctta 1716
|||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 1 ggattaaacaattctattggggtgacagggatttgacaaaacatgacatctaaatcctta 60
Query: 1717 cagacgtactgtcagatgtacactttgtggtggcagcttacagatacgccagttgctatt 1776
||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 cagacgtactgtccgatgtacactttgtggtggcagcttacagatannccagttgctatt 120
Query: 1777 ctaaatatagcagtcccgtttacatgtatagatttaatttagtaacagaattgaattgga 1836
|||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 ctaagtataacaggcccgtttacatgtatagatttaatttactaacagaattgaattgga 180
Query: 1837 tacagcagatgctcggaatgaccgaacacaaaggtgcctgccattttgatgacgtgtttt 1896
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 181 tacannncatgctcggaatgaccgaacacannnntgcctgccattttgatgacgtgtttt 240
Query: 1897 atatatttagtaacggaatgaatagagagaaatatgaaaatagtcccattctacaagaac 1956
|||||||||| | || ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 atatatttagnnanggnntgaatagagnnnaatatgaaaatagtcccattctacaagaac 300
Query: 1957 atatccacagaatcaccaaaatgtggaccgac 1988
|||||| ||| || ||||||||||||||||||
Sbjct: 301 atatccgcagcattaccaaaatgtggaccgac 332
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 393,734
Number of extensions: 9001
Number of successful extensions: 9001
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8999
Number of HSP's successfully gapped: 2
Length of query: 2686
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2669
Effective length of database: 8,119,229
Effective search space: 21670222201
Effective search space used: 21670222201
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)