BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12738 (UTR included)
(1843 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B1E11 942 0.0
>BF01028B1E11
Length = 628
Score = 942 bits (475), Expect = 0.0
Identities = 490/495 (98%)
Strand = Plus / Plus
Query: 477 gccttaattattcacttattaatcatgtcagaaaaagttgctatagtaactggagctaac 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gccttaattattcacttattaatcatgtcagaaaaagttgctatagtaactggagctaac 193
Query: 537 aaaggacttggacttgccatagtcaaggaactatgtaaaaattatgaaggtacagtttat 596
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 194 aaaggacttggacttgccatagtcaagaaactatgtaaaaattatgaaggtacagtttat 253
Query: 597 ttaacatccagagatgagaaaagaggttatgaagcttgtgaacaattaagggaattggac 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttaacatccagagatgagaaaagaggttatgaagcttgtgaacaattaagggaattggac 313
Query: 657 ataaaaccacagtatcatcaactagatataactgacagtgatagtattgaaaaattctgt 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ataaaaccacagtatcatcaactagatataactgacagtgatagtattgaaaaattctgt 373
Query: 717 tttttcattcgttctcatcataaaaatattgatttgttgatcaacaacgctggcatattg 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tttttcattcgttctcatcataaaaatattgatttgttgatcaacaacgctggcatattg 433
Query: 777 tttcttaaggattgtcaggaatctaaactctaccaagctgagcaaacattgtatgtaaac 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tttcttaaggattgtcaggaatctaaactctaccaagctgagcaaacattgtatgtaaac 493
Query: 837 tttttcgcgctagttaatttcactgaggcagttttaccgctgatgagtgatcatagcaca 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tttttcgcgctagttaatttcactgaggcagttttaccgctgatgagtgatcatagcaca 553
Query: 897 atattgaatatctcaagttcatcaggtcatctatcaagattaccatcggttgaattccga 956
||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 554 atactgaatatctcaagttcatcaggtcatctatcaagattaccatcggtggaactccga 613
Query: 957 gaaagatttcaagat 971
||||||||||||||
Sbjct: 614 caaagatttcaagat 628
Score = 202 bits (102), Expect = 1e-51
Identities = 128/134 (95%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 149 aaacaaataaatgttgggtttagatttatcgtttacctaacatataaaagtaggtgtagt 208
||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 1 aaacaaaaaaatgttgggtttagatttatcgtttacctaacatgtaaaactaggtgtagt 60
Query: 209 agtactttaatccttttccatcagaataaaagttataaagaaaacttagc-aaacattgt 267
|||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 agtactttaaacc-tttccatcagaataaaagttataaagaaaacttagcaaaacattgt 119
Query: 268 ttcagcaaatactt 281
||||||||||||||
Sbjct: 120 ttcagcaaatactt 133
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 292,864
Number of extensions: 7584
Number of successful extensions: 7584
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7582
Number of HSP's successfully gapped: 2
Length of query: 1843
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1826
Effective length of database: 8,119,229
Effective search space: 14825712154
Effective search space used: 14825712154
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)