BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12749 (UTR included)
(741 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1312_C1 523 e-148
>BF14_1312_C1
Length = 1325
Score = 523 bits (264), Expect = e-148
Identities = 281/286 (98%), Gaps = 3/286 (1%)
Strand = Plus / Plus
Query: 24 acaggagcattctcactcccgttgcgacgatgataccagccgtatgcgcgaaggtagtct 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 acaggagcattctcactcccgttgcgacgatgataccagccgtatgcgcgaaggtagtct 1102
Query: 84 cctgtctagacccatgggtgtacgccatcaaccaccccagatatagggctgaacttcaga 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 cctgtctagacccatgggtgtacgccatcaaccaccccagatatagggctgaacttcaga 1162
Query: 144 aacgtgtgccctggatgggagtccgtgaagccgaccctgacaacacctccaacgtgagcg 203
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1163 aacgtgtgccctggatgggagtccgtgaagccgaccctgacaa---ctccaacgtgagcg 1219
Query: 204 gagccacagctcaaacacagaaccctgctgaagcgtgaacattcaaccttactaccatca 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 gagccacagctcaaacacagaaccctgctgaagcgtgaacattcaaccttactaccatca 1279
Query: 264 caaagagttcactgttcatgtgcaataactctccatgttatacctt 309
||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 1280 caaagagttcacttttaatgtgcaataactctccatgttatacctt 1325
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 203,480
Number of extensions: 35422
Number of successful extensions: 35422
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 35421
Number of HSP's successfully gapped: 1
Length of query: 741
Length of database: 8,280,457
Length adjustment: 16
Effective length of query: 725
Effective length of database: 8,128,713
Effective search space: 5893316925
Effective search space used: 5893316925
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)