BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12760 (UTR included)
(1405 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1H08 1516 0.0
>BF01023B1H08
Length = 812
Score = 1516 bits (765), Expect = 0.0
Identities = 803/813 (98%), Gaps = 2/813 (0%)
Strand = Plus / Plus
Query: 359 ttaaaaataaagcagtgaacaatctctaggaattgaaacatagaaaaataatatttcgac 418
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 1 ttaaaaataaagcagtgaacaatctctaggaattgaaacatagaaaaataaaatttcgtc 60
Query: 419 tgatattgtgataattacttttaaaagttttggttagttgctaaatatttgtaaataggt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgatattgtgataattacttttaaaagttttggttagttgctaaatatttgtaaataggt 120
Query: 479 ttaaaggttacatttcaacataatggacgctacaatggagaacaaaatgggacttccccc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaaaggttacatttcaacataatggacgctacaatggagaacaaaatgggacttccccc 180
Query: 539 accgtacgagcaggtcccgccaaacccggccccaccaccgtcttacttcgccacagctcc 598
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accgtacgagcaggtcccaccaaacccggccccaccaccgtcttacttcgccacagctcc 240
Query: 599 ccaaccgcctgaagtgcaaccaaggacggtggtggtgacgtcgactccaacagtgacgac 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaaccgcctgaagtgcaaccaaggacggtggtggtgacgtcgactccaacagtgacgac 300
Query: 659 acgaaccaccacaattaagctaggcccagggccgacggggacgtcatgtcctaattgcaa 718
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 acgaaccaccacaattaagctaggcccggggccgacggggacgtcatgtcctaattgcaa 360
Query: 719 caagcctatcgtaactagagttgaatacgtgtctaacaacagaactcacatagtatcagc 778
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caagcctatcgtgactagagttgaatacgtgtctaacaacagaactcacatagtatcagc 420
Query: 779 tggactctgtattcttgccggttgctgctgcggttgcctcgtgccatattgcatgagatc 838
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 421 tggactctgtattcttgccggttgctgctgcggttgtctcgtgccatattgcatgagatc 480
Query: 839 atgcaagacagcgaaccattactgtccccagtgtaaagctttcataggctctcacgttcc 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgcaagacagcgaaccattactgtccccagtgtaaagctttcataggctctcacgttcc 540
Query: 899 gtcctaatttatataagaacattagtttacaatgtgttagaataacagcagggattttat 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcctaatttatataagaacattagtttacaatgtgttagaataacagcagggattttat 600
Query: 959 ataaatataatacattacaagctgaaatctgaatgaatgaaatgatttttttttttgttt 1018
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 601 ataaatataatacataacaagctgaaatctgaatgaatgaaatga-ttttttttttgttt 659
Query: 1019 atcattaaatcgaggtgacagattaaaaaaaaa-tataaatgattccaagaaggtttata 1077
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 660 atcattaaatcgaggtgacagattaaaaaaaaattataaatgattccaagacggtttata 719
Query: 1078 gataataaaacagaagtacatagaatatatattcgttgtaaacaaatttttagaataatt 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gataataaaacagaagtacatagaatatatattcgttgtaaacaaatttttagaataatt 779
Query: 1138 agtgtatcctattaatttgttatatcattttat 1170
|||||||||||||||||||||||||||||||||
Sbjct: 780 agtgtatcctattaatttgttatatcattttat 812
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,825
Number of extensions: 8442
Number of successful extensions: 8442
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8440
Number of HSP's successfully gapped: 1
Length of query: 1405
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1388
Effective length of database: 8,119,229
Effective search space: 11269489852
Effective search space used: 11269489852
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)