BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12764 (UTR included)
(2065 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1099_C1 1744 0.0
>BF14_1099_C1
Length = 1830
Score = 1744 bits (880), Expect = 0.0
Identities = 985/1028 (95%), Gaps = 34/1028 (3%)
Strand = Plus / Plus
Query: 515 gattttctttactgtttgccaaaaaataatttatgcgtgtattgtgagcggatctatacc 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 gattttctttactgtttgccaaaaaataatttatgcgtgtattgtgagcggatctatgcc 60
Query: 575 gatcgtgaagccggattatttaataatttg----------------ctgcgatcgtaaga 618
|||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 gatcgtgaagccggattatttaataatttgtataacaaattaacggctgcgatcgtaaga 120
Query: 619 tgatgcatcacccgaacattcatcatcagccgatgtcgggacacccgcagcacatgccgg 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatgcatcacccgaacattcatcatcagccgatgtcgggacacccgcagcacatgccgg 180
Query: 679 cgcaccagcccatgcccgcccaccatcaactgccgcaccaaatgcaccgggagaacaggc 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcaccagcccatgcccgcccaccatcaactgccgcaccaaatgcaccgggagaacaggc 240
Query: 739 acgtaactctcactagggtgccgttgggtccgtcacaggcgggcggtatgggcgcccacg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgtaactctcactagggtgccgttgggtccgtcacaggcgggcggtatgggcgcccacg 300
Query: 799 ctcagctcggcggcatgggcgtgcatcacgcccaccatgggcgaccgcacaccattcgcg 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctcagctcggcggcatgggcgtgcatcacgcccaccatgggcgaccgcacaccattcgcg 360
Query: 859 ccgtacaccatccgcccacgcaacaccataatgtaccaacgccgacccgtctccgtcgtc 918
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 361 ccgtacaccatccgcccacgcaacaccataatgtaccaacgccgacccgtcttcgtcgtc 420
Query: 919 cttacggcggtggctacactcccggagtggttcccttcacacagccgccgccgatgccgc 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttacggcggtggctacactcccggagtggttcccttcacacagccgccgccgatgccgc 480
Query: 979 ctcctactacgcaacaaaaccacaatgtggtatcgggagtcaataccaaaacgccaacac 1038
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctcctgctacgcaacaaaaccacaatgtggtatcgggagtcaataccaaaacgccaacac 540
Query: 1039 cgacaatcgaagccaaagagagtttagcgtcccccaccggcactgaaacttccggtactg 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 541 cgacaatcgaagccaaagagagtttagcgtcccccaccggcactgaaacttccggcactg 600
Query: 1099 gcactggca------------------ctggcaatggcaatggcaatggatctggcacca 1140
||||||||| ||||||||||| ||||||||| |||||||||
Sbjct: 601 gcactggcaatggctctggcaatggctctggcaatggctctggcaatggctctggcaccg 660
Query: 1141 gcactgacgcggatattgacgacaaggacaaggcctcggtagaggcgaccgactccgaga 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcactgacgcggatattgacgacaaggacaaggcctcggtagaggcgaccgactccgaga 720
Query: 1201 cacgctcgaccgcctcggccaacagtaaagagaagacaccaatgtgcttggtcaatgaac 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cacgctcgaccgcctcggccaacagtaaagagaagacaccaatgtgcttggtcaatgaac 780
Query: 1261 ttgccaggtacaataagattaagcatcagtatcgcctcacatcagagacggggcccgctc 1320
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tggccaggtacaataagattaagcatcagtatcgcctcacatcagagacggggcccgctc 840
Query: 1321 acaagaaagtattcacagtgacactcagactcggtgacgctgaggaatacacagctgagg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 acaagaaagtattcacagtgacactcagactcggtgacgctgaggaatacacagctgagg 900
Query: 1381 ggtcttcaataaaacgcgcccagcacgcggcggctagcgcggctctgtcgggcacacgct 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ggtcttcaataaaacgcgcccagcacgcggcggctagcgcggctctgtcgggcacacgct 960
Query: 1441 acccccctcccccgccgcgcgcccccccgccgcacacacaccacgcacaccaccacaagc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 acccccctcccccgccgcgcgcccccccgccgcacacacaccacgcacaccaccacaagc 1020
Query: 1501 acgccggt 1508
||||||||
Sbjct: 1021 acgccggt 1028
Score = 234 bits (118), Expect = 5e-61
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1698 tcgcctgccgtaccggctgccggccttcgtgccgccctacccccaccctcacccccatcc 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 tcgcctgccgtaccggctgccggccttcgtgccgccctacccccaccctcacccccatcc 1180
Query: 1758 agcaacacacgcttccctagcgccgagactcatggagcccagttccttattatatagg 1815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 agcaacacacgcttccctagcgccgagactcatggagcccagttccttattatatagg 1238
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 277,869
Number of extensions: 7181
Number of successful extensions: 7181
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7180
Number of HSP's successfully gapped: 4
Length of query: 2065
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2048
Effective length of database: 8,119,229
Effective search space: 16628180992
Effective search space used: 16628180992
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)