BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12765 (UTR included)
(2353 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1099_C1 1352 0.0
>BF14_1099_C1
Length = 1830
Score = 1352 bits (682), Expect = 0.0
Identities = 703/710 (99%)
Strand = Plus / Plus
Query: 410 tcgcctgccgtaccggctgccggccttcgtgccgccctacccccaccctcacccccatcc 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 tcgcctgccgtaccggctgccggccttcgtgccgccctacccccaccctcacccccatcc 1180
Query: 470 agcaacacacgcttccctagcgccgagactcatggagcccagttccttattatatagggt 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 agcaacacacgcttccctagcgccgagactcatggagcccagttccttattatatagggt 1240
Query: 530 gcgtgtaactgtgggcggtcgctcctgggtaggcgagggggcgacgccccagggcgcccg 589
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1241 gcgtgtaactgtgggcggtcgctcctgggtaggcgagggagcgacgccccagggcgcccg 1300
Query: 590 gcacgacgccgcagcccgagcgctccacgacctgagatcagtcgcagaacatcaggacaa 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 gcacgacgccgcagcccgagcgctccacgacctgagatcagtcgcagaacatcaggacaa 1360
Query: 650 cgacagcggtgacgccggatcagataatatgttgaactcagacgttaaatctccagtatc 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 cgacagcggtgacgccggatcagataatatgttgaactcagacgttaaatctccagtatc 1420
Query: 710 gctggtacacgagttagctctgaaacgagatctatctgttcagttcaccgtcaagtctga 769
||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 1421 gctggtacacgagttggctctgaaaagagatctgtctgttcagttcaccgtcaagtctga 1480
Query: 770 gcggggaccgccgcatatgagggtgttcgtgacgctgtgcacggtcggcgagatggagac 829
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1481 gcggggaccgccgcatatgagggtgttcgtgacgctgtgcacggtgggcgagatggagac 1540
Query: 830 ggagggggaggggaacggcaagaagatctcaaagaggcgagcggccgagaggatgctgga 889
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1541 ggagggggaggggaacggcaagaagatctccaagaggcgagcggccgagaggatgctgga 1600
Query: 890 ggagatgaggaggcgctggccgcccgccctgctcaggacccgcccgcccacagatagaag 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1601 ggagatgaggaggcgctggccgcccgccctgctcaggacccgcccgcccacagatagaag 1660
Query: 950 gagacacccgcccgccaagaagaagcccaggaaccttattaaggagggcggtgaggaggc 1009
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1661 gagacacccgcccgccaagaagaagcccaggaaccttattaaggagggcggtgaggaggg 1720
Query: 1010 tggttgtgcgaagtcaaacaacggcactccagcgtcctcgggcggttcagacaacccgat 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 tggttgtgcgaagtcaaacaacggcactccagcgtcctcgggcggttcagacaacccgat 1780
Query: 1070 atcccggctggcggttgcaaggaacgcggcgagggcgcgctcaccacagt 1119
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1781 atcccggctggcggttgcaaggaacgcggcgagggcgcgctcaccacagt 1830
Score = 260 bits (131), Expect = 9e-69
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 90 aggggtcttcaataaaacgcgcccagcacgcggcggctagcgcggctctgtcgggcacac 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 aggggtcttcaataaaacgcgcccagcacgcggcggctagcgcggctctgtcgggcacac 957
Query: 150 gctacccccctcccccgccgcgcgcccccccgccgcacacacaccacgcacaccaccaca 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 gctacccccctcccccgccgcgcgcccccccgccgcacacacaccacgcacaccaccaca 1017
Query: 210 agcacgccggt 220
|||||||||||
Sbjct: 1018 agcacgccggt 1028
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,928
Number of extensions: 5049
Number of successful extensions: 5049
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5049
Number of HSP's successfully gapped: 2
Length of query: 2353
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2336
Effective length of database: 8,119,229
Effective search space: 18966518944
Effective search space used: 18966518944
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)