BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12778 (UTR included)
(1840 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 127 7e-29
BF01042A2B06 94 9e-19
BF01049B2H03 84 9e-16
BF01025A1A12 82 4e-15
BF01012A1B09 80 1e-14
BF14_729_C2 78 6e-14
BF01058B2C06 76 2e-13
BF01062A1H02 74 9e-13
BF01012A2C11 72 3e-12
BF01019B1G10 68 5e-11
BF01011A1H06 68 5e-11
>BF14_729_C3
Length = 2041
Score = 127 bits (64), Expect = 7e-29
Identities = 134/154 (87%), Gaps = 5/154 (3%)
Strand = Plus / Minus
Query: 1548 atgagatctaagacttttgcgagtatacatttaaatgatactaatatt-ttcagat-tac 1605
||||||||||||| ||| |||||||| ||||||||||| ||| |||| ||| ||| |||
Sbjct: 1729 atgagatctaagattttcgcgagtattcatttaaatgaagctagtattattcggatatac 1670
Query: 1606 ttcgcgtattttattatttttaaaaaactatatacttccgacgtttcggttactttgcag 1665
| |||| |||||||||||| |||||||| ||| | |||||||||||||||||||||||
Sbjct: 1669 tacgcggattttattattt---aaaaactacataatcccgacgtttcggttactttgcag 1613
Query: 1666 caaacgtgatcacgggcgggcgaggtgtgaatgt 1699
||| ||||||||||||| | ||||||||||||||
Sbjct: 1612 caaccgtgatcacgggcagacgaggtgtgaatgt 1579
>BF01042A2B06
Length = 781
Score = 93.7 bits (47), Expect = 9e-19
Identities = 117/138 (84%), Gaps = 3/138 (2%)
Strand = Plus / Minus
Query: 1545 ataatgagatctaagacttttgcgagtatacatttaaatgatactaatattttcagatta 1604
||||||||||| |||||||| |||||||| | ||||||| | | |||||||||| |||||
Sbjct: 374 ataatgagatcaaagactttcgcgagtattcgtttaaattaaagtaatattttcggatta 315
Query: 1605 cttcgcg-tattttattatt--tttaaaaaactatatacttccgacgtttcggttacttt 1661
|| |||| ||||| |||||| ||| ||||||| ||||| |||||||||||||||||
Sbjct: 314 ctacgcgttatttaattatttatttttaaaactacatactcacgacgtttcggttacttc 255
Query: 1662 gcagcaaacgtgatcacg 1679
||||||| ||| ||||||
Sbjct: 254 gcagcaaccgtaatcacg 237
>BF01049B2H03
Length = 832
Score = 83.8 bits (42), Expect = 9e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 1545 ataatgagatctaagacttttgcgagtatacatttaaatgatactaata-ttttcagatt 1603
|||||||||||||||| ||| |||||||| ||||||||||| ||||||| ||||| ||||
Sbjct: 355 ataatgagatctaagattttagcgagtattcatttaaatgaaactaatatttttcggatt 296
Query: 1604 acttcgcgtattttatta 1621
||| |||||||||||||
Sbjct: 295 actaagcgtattttatta 278
>BF01025A1A12
Length = 880
Score = 81.8 bits (41), Expect = 4e-15
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 1577 tttaaatgatactaatattttcagattacttcgcgtattttattatttttaaaaaactat 1636
||||||||| |||||||||||| ||| |||||||||||||||||| ||| ||||||||
Sbjct: 84 tttaaatgaaactaatattttcggatagcttcgcgtattttattatgttt-aaaaactac 142
Query: 1637 atacttccgacgtttcggttactttgcag 1665
||||| |||||||||| ||| ||||||||
Sbjct: 143 atactcccgacgtttccgtt-ctttgcag 170
>BF01012A1B09
Length = 841
Score = 79.8 bits (40), Expect = 1e-14
Identities = 118/140 (84%), Gaps = 8/140 (5%)
Strand = Plus / Plus
Query: 1548 atgagatctaagacttttgcgagt---atacatttaaatgatactaatat-tttcagatt 1603
||||||||||||||| | |||||| || ||||||||||| |||||||| |||| |||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggata 764
Query: 1604 -acttcgcgtattttattatttttaaaaaactatatacttccgacgtttcggttactttg 1662
||| |||| ||||||||||||| ||||||| ||| | |||||||||||||||||||
Sbjct: 765 cactacgcggattttattatttt---aaaactacataatcccgacgtttcggttactttt 821
Query: 1663 cagcaaacgtgatcacgggc 1682
||||| |||||||||||||
Sbjct: 822 cagcagccgtgatcacgggc 841
>BF14_729_C2
Length = 1289
Score = 77.8 bits (39), Expect = 6e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 1628 aaaaactatatacttccgacgtttcggttactttgcagcaaacgtgatcacgggc 1682
|||||||| ||||| ||||||||||||||||||| |||||| |||||||||||||
Sbjct: 590 aaaaactacatactcccgacgtttcggttacttttcagcaaccgtgatcacgggc 536
>BF01058B2C06
Length = 772
Score = 75.8 bits (38), Expect = 2e-13
Identities = 87/102 (85%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 1579 taaatgatactaatattttcagattacttcgcgtattttattatttttaaaaaactatat 1638
||||||| |||||||||||| ||||||| ||||| |||||| ||| | |||| ||| ||
Sbjct: 372 taaatgaaactaatattttctgattactacgcgtgctttattttttgttaaaa-ctacat 430
Query: 1639 acttccgacgtttcggttactttgcagcaaacgtgatcacgg 1680
| | ||||||||||||||||||||| ||| |||||||||||
Sbjct: 431 attcccgacgtttcggttactttgctgcagccgtgatcacgg 472
>BF01062A1H02
Length = 876
Score = 73.8 bits (37), Expect = 9e-13
Identities = 88/104 (84%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 1577 tttaaatgatactaatattttcagattacttcgcgtattttattatttttaaaaaactat 1636
||||||||| |||||||||||| |||||| |||||||| || ||||| ||||||||
Sbjct: 382 tttaaatgaaactaatattttcggattacaaagcgtatttcatcatttt--aaaaactac 325
Query: 1637 atacttccgacgtttcggttactttgcagcaaacgtgatcacgg 1680
||||| ||| ||||||||||||| ||||||| || ||||||||
Sbjct: 324 atactcacgaagtttcggttacttcgcagcaaccgcgatcacgg 281
>BF01012A2C11
Length = 780
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1628 aaaaactatatacttccgacgtttcggttactttgcagcaaacgtgatcacg 1679
|||||||| || || |||||||||||||||||||||||||| ||||||||||
Sbjct: 242 aaaaactaaatgctcccgacgtttcggttactttgcagcaaccgtgatcacg 293
>BF01019B1G10
Length = 488
Score = 67.9 bits (34), Expect = 5e-11
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1602 ttacttcgcgtattttattatttttaaaaaactatatacttccgacgtttcggttacttt 1661
||||| |||| ||||||||||||| |||||||| ||| | |||||||||||||| ||||
Sbjct: 317 ttactacgcgaattttattatttt--aaaaactacataatcccgacgtttcggttccttt 374
Query: 1662 gcagcaaacgtgatcacgggc 1682
||| || |||||||||||||
Sbjct: 375 tcagtaaccgtgatcacgggc 395
>BF01011A1H06
Length = 739
Score = 67.9 bits (34), Expect = 5e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 1626 taaaaaactatatacttccgacgtttcggttactttgcagcaaacgtgatcacgggcggg 1685
||||| |||| ||||| ||||||||||||||||||| ||| || ||||||||||||| |
Sbjct: 524 taaaagactacatactcccgacgtttcggttacttttcagtaaccgtgatcacgggcaga 465
Query: 1686 cgaggtgtga 1695
|||| |||||
Sbjct: 464 cgagatgtga 455
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 173,971
Number of extensions: 3702
Number of successful extensions: 3702
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 3691
Number of HSP's successfully gapped: 11
Length of query: 1840
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1823
Effective length of database: 8,119,229
Effective search space: 14801354467
Effective search space used: 14801354467
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)