BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12783 (UTR included)
(3454 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B1C08 1473 0.0
>BF01058B1C08
Length = 785
Score = 1473 bits (743), Expect = 0.0
Identities = 755/759 (99%)
Strand = Plus / Plus
Query: 1568 atcagttctggaagagaacggcggtaaaacatccaagcattccatagtgactgtgggagt 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcagttctggaagagaacggcggtaaaacatccaagcattccatagtgactgtgggagt 60
Query: 1628 gcagtatctagaccacctgctggccgaacgcctgttcgatgaagcggcggtcttgtgtgc 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcagtatctagaccacctgctggccgaacgcctgttcgatgaagcggcggtcttgtgtgc 120
Query: 1688 cagaatatgtaaaaatgacaaagtgttgtgggaaaatcaaatatttaagttctctaagat 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagaatatgtaaaaatgacaaagtgttgtgggaaaatcaaatatttaagttctctaagat 180
Query: 1748 gaatcaattgcgagccatcagcccctacgtgcccagaaaccctggtcaagcgctgagtcc 1807
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 gaatcaattgcgagccatcagcccctacgtgcccagaaaccctggtcaagcactgagtcc 240
Query: 1808 gcatatttacgaactcatatttttggaatacctaaaggaggaccctcaaggtttcctcag 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcatatttacgaactcatatttttggaatacctaaaggaggaccctcaaggtttcctcag 300
Query: 1868 gctagttcaggaatggaaccccgctctgtataaaaccggagtcatcataaaagcagtatt 1927
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actagttcaggaatggaaccccgctctgtataaaaccggagtcatcataaaagcagtatt 360
Query: 1928 agattatcttttaacgacggaggtcgagaagaacatttatttagaagctctggctctcct 1987
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agattatctattaacgacggaggtcgagaagaacatttatttagaagctctggctctcct 420
Query: 1988 ctactgctaccagaagaaatacgacaaagcactcaccgcgtacttacgactgcagcacaa 2047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctactgctaccagaagaaatacgacaaagcactcaccgcgtacttacgactgcagcacaa 480
Query: 2048 agacgtctttaaactgatcactaaacacaacatgtactccgtcatatacgacaagatact 2107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agacgtctttaaactgatcactaaacacaacatgtactccgtcatatacgacaagatact 540
Query: 2108 ggaactgatgtctctcgactgtgataaggcgatcgccatcctcttacaagacaagaccaa 2167
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggaactgatgtccctcgactgtgataaggcgatcgccatcctcttacaagacaagaccaa 600
Query: 2168 ggtccccgtccaagtagtggagaagcagctggccgaccacgacgagtacttattcaaata 2227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggtccccgtccaagtagtggagaagcagctggccgaccacgacgagtacttattcaaata 660
Query: 2228 cttggacgcgtacagtaaagtcgaacccaacggacgataccacgggaagctagtcaggct 2287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttggacgcgtacagtaaagtcgaacccaacggacgataccacgggaagctagtcaggct 720
Query: 2288 gtacgccaaatacgccagggaaaaattactaccgtttct 2326
|||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtacgccaaatacgccagggaaaaattactaccgtttct 759
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 366,072
Number of extensions: 7474
Number of successful extensions: 7474
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7474
Number of HSP's successfully gapped: 1
Length of query: 3454
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3436
Effective length of database: 8,109,745
Effective search space: 27865083820
Effective search space used: 27865083820
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)