BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12785 (UTR included)
(5104 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_444_C1 1261 0.0
BF01049A1G12 654 0.0
>BF14_444_C1
Length = 1224
Score = 1261 bits (636), Expect = 0.0
Identities = 655/661 (99%), Gaps = 1/661 (0%)
Strand = Plus / Plus
Query: 4444 aaatattcgacgtgtccgcagtctcgctcggtctctcgatgatagtttgtcgtctcggac 4503
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 aaatattcgacgtgtccgcagtctcgctcnnnctctcgatgatagtttgtcgtctcggac 60
Query: 4504 acttcacgttttccttgctccagcctccaggttccagctcgttccgtctctcccgcgtca 4563
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 acttcacattttccttgctccagcctccaggttccaactcgttccgtctctcccgcgtca 120
Query: 4564 tcgtttcctctgggtcgtatcttcgctgcccaccgacgtagtgccatattcagtatgaac 4623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgtttcctctgggtcgtatcttcgctgcccaccgacgtagtgccatattcagtatgaac 180
Query: 4624 aaagttcaaatcgcggtttcctgtacattttccgcttccaagcgtactccgtgtccagag 4683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagttcaaatcgcggtttcctgtacattttccgcttccaagcgtactccgtgtccagag 240
Query: 4684 cggtcccaggtcgctgatcgactgggatgtttcgttttttatcttcgttgtgtcacttcc 4743
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cggtcccaggt-gctgatcgactgggatgtttcgttttttatcttcgttgtgtcacttcc 299
Query: 4744 ggtgagtcgtgtctgtgtaggccgctgtatgccagtcctctgtatcccgctgtatgtaac 4803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggtgagtcgtgtctgtgtaggccgctgtatgccagtcctctgtatcccgctgtatgtaac 359
Query: 4804 ccggtcttcttgtaaatatcttcatagagtgagactgcccccggccgctgagcgtgcgtc 4863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ccggtcttcttgtaaatatcttcatagagtgagactgcccccggccgctgagcgtgcgtc 419
Query: 4864 tacccggatcgttcgagcttaggcctgagccgagcggcgtcgcctgacggccgtcggttc 4923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tacccggatcgttcgagcttaggcctgagccgagcggcgtcgcctgacggccgtcggttc 479
Query: 4924 cgtagtgtatattatttaatcgtcgtaagctgtacttagctaaatatttatctttatatg 4983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cgtagtgtatattatttaatcgtcgtaagctgtacttagctaaatatttatctttatatg 539
Query: 4984 tagcacgtaacatggacgaagtgttcaagaggtgctagctgaaggtgtatcgaccatact 5043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tagcacgtaacatggacgaagtgttcaagaggtgctagctgaaggtgtatcgaccatact 599
Query: 5044 ccgtagactgatctccgacagccgagcgtgttgtccgagacagtgtaggcagtagccagt 5103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ccgtagactgatctccgacagccgagcgtgttgtccgagacagtgtaggcagtagccagt 659
Query: 5104 a 5104
|
Sbjct: 660 a 660
>BF01049A1G12
Length = 596
Score = 654 bits (330), Expect = 0.0
Identities = 333/334 (99%)
Strand = Plus / Plus
Query: 3616 gtctggcgcagctggtgtcggagcagttcgcgcccgctgacgacggacgacgggcgaggg 3675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtctggcgcagctggtgtcggagcagttcgcgcccgctgacgacggacgacgggcgaggg 322
Query: 3676 cggaacacaacctgtcgggcgggtctctgggcggcgagtacagcgcgcccccggccggca 3735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cggaacacaacctgtcgggcgggtctctgggcggcgagtacagcgcgcccccggccggca 382
Query: 3736 cgctgctgcggtggagcgcgcggaacaggtcgctagcgctggctggacaggccgccaccg 3795
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 383 cgctgctgcggtggagcgcgcggaacaggtcgctggcgctggctggacaggccgccaccg 442
Query: 3796 tcaggctctgggacgcacacgccgagatgctgcacgccgacatacccacagagagcgagg 3855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcaggctctgggacgcacacgccgagatgctgcacgccgacatacccacagagagcgagg 502
Query: 3856 cggcagcgaccagtctgtggcgcggcgggcgggcggcgcgcgtcgtgtgcggcttcggcg 3915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cggcagcgaccagtctgtggcgcggcgggcgggcggcgcgcgtcgtgtgcggcttcggcg 562
Query: 3916 acggctcggtgagggcgtgggacgagcgcagccc 3949
||||||||||||||||||||||||||||||||||
Sbjct: 563 acggctcggtgagggcgtgggacgagcgcagccc 596
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 395,015
Number of extensions: 7346
Number of successful extensions: 7346
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7345
Number of HSP's successfully gapped: 2
Length of query: 5104
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5086
Effective length of database: 8,109,745
Effective search space: 41246163070
Effective search space used: 41246163070
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)