BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN12786 (UTR included)
         (1690 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_1578_C1                                                          448   e-125

>BF14_1578_C1
          Length = 1202

 Score =  448 bits (226), Expect = e-125
 Identities = 251/258 (97%), Gaps = 1/258 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1433 gtttaagagtaatatttttatactactgttattttattatacatttacaccagaacggtt 1492
            |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1202 gtttaagagtaatattttgatactactgttattttattatacatttacaccagaacagtt 1143

                                                                        
Query: 1493 tctttcattgcatattaacctacccatagaattaatatcacaacacagccgtgacaggaa 1552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 tctttcattgcatattaacctacccatagaattaatatcacaacacagccgtgacaggaa 1083

                                                                        
Query: 1553 tgatttaacaaatgccactttcgactgaatcaagcttgtctaatgcaacatataaataaa 1612
            ||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 1082 tgattcaacaaatgccactttcgactgaatcaagcttggctaatgc-acatataaataaa 1024

                                                                        
Query: 1613 tataatatgccaaaaggaacagacattaataacaaataaggatcttagttatctcgagag 1672
            || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1023 tacaatatgccaaaaggaacagacattaataacaaataaggatcttatttatctcgagag 964

                              
Query: 1673 gaatcatttcagaaagtc 1690
            ||||||||||||||||||
Sbjct: 963  gaatcatttcagaaagtc 946


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,796
Number of extensions: 5327
Number of successful extensions: 5327
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5326
Number of HSP's successfully gapped: 1
Length of query: 1690
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1673
Effective length of database: 8,119,229
Effective search space: 13583470117
Effective search space used: 13583470117
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)