BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12791 (UTR included)
(6403 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_662_C1 3661 0.0
>BF14_662_C1
Length = 1871
Score = 3661 bits (1847), Expect = 0.0
Identities = 1865/1871 (99%)
Strand = Plus / Plus
Query: 4196 gggtgaccgccgcagccagtcggggggcgcggcgggcggtgctcgcctcagcacgcagcc 4255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtgaccgccgcagccagtcggggggcgcggcgggcggtgctcgcctcagcacgcagcc 60
Query: 4256 catcaacatcccgggctcccctcagagacagagctcgtccagcaccacggacgacgagga 4315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catcaacatcccgggctcccctcagagacagagctcgtccagcaccacggacgacgagga 120
Query: 4316 gatgctgctcacgcggccggagggtaaatctcgtcatcacgtgcgtcgctccaactcgtc 4375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgctgctcacgcggccggagggtaaatctcgtcatcacgtgcgtcgctccaactcgtc 180
Query: 4376 cccggagatgtcatctctgaagggtctgtcgcgggagcacgagcacgacttcaccgaccc 4435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccggagatgtcatctctgaagggtctgtcgcgggagcacgagcacgacttcaccgaccc 240
Query: 4436 cgacgaacacatcctgctgcccatgtgtgaaccggcgaacccggtgtctctacacgcgcc 4495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgacgaacacatcctgctgcccatgtgtgaaccggcgaacccggtgtctctacacgcgcc 300
Query: 4496 gaagaaggctcccaagaaaacggacactcgcgtgtcatgtgaggccataccggaggagat 4555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagaaggctcccaagaaaacggacactcgcgtgtcatgtgaggccataccggaggagat 360
Query: 4556 gagcggcacctcgccgcagcctcaccctcaccctcagcaccctcaacaccctcagcaccc 4615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagcggcacctcgccgcagcctcaccctcaccctcagcaccctcaacaccctcagcaccc 420
Query: 4616 acagcagacgcaacacccgcaccctcaccctcacctcgtcacatacaactcggacccggg 4675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acagcagacgcaacacccgcaccctcaccctcacctcgtcacatacaactcggacccggg 480
Query: 4676 agcgggcgaggagccgcgaccctccgcgcaccagctgcagaagacgagcagcgacagtcg 4735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agcgggcgaggagccgcgaccctccgcgcaccagctgcagaagacgagcagcgacagtcg 540
Query: 4736 cgttactctcagctccaccgagggtcgcggagtgggagcaggggtcgcgggcggcggggg 4795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgttactctcagctccaccgagggtcgcggagtgggagcaggggtcgcgggcggcggggg 600
Query: 4796 gctggggccgggagcgggggcggagcaccgggacgggcgggacgagctgcagcccctcgc 4855
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 601 gctggggccgggagcgggggcggagcaccgggacgggcgggacgagctgcaacccctcgc 660
Query: 4856 ccgatccaagagatccaacactatcagcgtcatgagccccacgaggaggaaccgtgagtc 4915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccgatccaagagatccaacactatcagcgtcatgagccccacgaggaggaaccgtgagtc 720
Query: 4916 tcctcgctccgcgtccagcacacccagctctgcgggcgggtccggggcgggaggaggtgc 4975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcctcgctccgcgtccagcacacccagctctgcgggcgggtccggggcgggaggaggtgc 780
Query: 4976 gggcggagtgtctccgtcgttcgtgttcctgcagctgtaccacaacatgagcacgtttcc 5035
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 781 gggcggagtgtctccgtcgttcgtgttcctgcaactgtaccacaacatgagcacgtttcc 840
Query: 5036 gatctcgccttgcgtgcccgggtctcctcccccgccgctggtgtgtggcggcgcgcttca 5095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gatctcgccttgcgtgcccgggtctcctcccccgccgctggtgtgtggcggcgcgcttca 900
Query: 5096 cgctcgaccgctcaaagtgtcggacgctcagcatcagaggaccatcaagaacctggacct 5155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cgctcgaccgctcaaagtgtcggacgctcagcatcagaggaccatcaagaacctggacct 960
Query: 5156 cgtgccgccgctcgagacctacaaggtgggcgtgctgtacgtgggccccggacagcagga 5215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cgtgccgccgctcgagacctacaaggtgggcgtgctgtacgtgggccccggacagcagga 1020
Query: 5216 cgacgaggtggctatactcaagaacgaatacggcagcgtcaggtacatggagttcctgcg 5275
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cgacgaggtggccatactcaagaacgaatacggcagcgtcaggtacatggagttcctgcg 1080
Query: 5276 tcagctgggcacgctggtgcctctggagggcgccgaggagcccaacctgttcctgaacct 5335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tcagctgggcacgctggtgcctctggagggcgccgaggagcccaacctgttcctgaacct 1140
Query: 5336 cgagaagggcggcaaggacggccggtacacgtacgtgtggagcgacgacatcatgcaagt 5395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cgagaagggcggcaaggacggccggtacacgtacgtgtggagcgacgacatcatgcaagt 1200
Query: 5396 gttgttccacgtggccaccgccatgcccagctccgacagggaccccacctgcaacgagaa 5455
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gttgttccacgtggcaaccgccatgcccagctccgacagggaccccacctgcaacgagaa 1260
Query: 5456 gaggaagtacatcggaaacgacttcgtcagcatcgtctacaacgactcgcagcacaactt 5515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gaggaagtacatcggaaacgacttcgtcagcatcgtctacaacgactcgcagcacaactt 1320
Query: 5516 caatatacacaccatcaagggtcagttcaacctgtgcatcgtggtggtggagccgctcgc 5575
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 caacatacacaccatcaagggtcagttcaacctgtgcatcgtggtggtggagccgctcgc 1380
Query: 5576 tcacggcatgcatcgcgtcaccttgaagagtaaggacgagagactccgcagcgagttcct 5635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tcacggcatgcatcgcgtcaccttgaagagtaaggacgagagactccgcagcgagttcct 1440
Query: 5636 agcacacgccgagcccgcctgcgtgtccgaccacaacgtggcgctgctagcgagacaaca 5695
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ggcacacgccgagcccgcctgcgtgtccgaccacaacgtggcgctgctagcgagacaaca 1500
Query: 5696 cgccctgcacgccgcgctggcctctcagatctcccagtccctgaagccgggcggcgagcc 5755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 cgccctgcacgccgcgctggcctctcagatctcccagtccctgaagccgggcggcgagcc 1560
Query: 5756 gtacgcgtccaactccctggagcgcctgagggtcatcaaacgcctgcgggcccgagcgct 5815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gtacgcgtccaactccctggagcgcctgagggtcatcaaacgcctgcgggcccgagcgct 1620
Query: 5816 ggccgcccgcctggctcggcccgcgccgccctacgccccgcccgaccctgcgcccctcgc 5875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ggccgcccgcctggctcggcccgcgccgccctacgccccgcccgaccctgcgcccctcgc 1680
Query: 5876 catcgacgacttcaaccactacacgtgactcccgcggggccgcgtctcgcccgctgaccg 5935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 catcgacgacttcaaccactacacgtgactcccgcggggccgcgtctcgcccgctgaccg 1740
Query: 5936 accccgccgcgacccgctcgcggctcgcctcgtgacgtcctgcacggagtcgactcgcgc 5995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 accccgccgcgacccgctcgcggctcgcctcgtgacgtcctgcacggagtcgactcgcgc 1800
Query: 5996 tctccgacgccaccgtgcggcgtcgtggcgcgatttaattttaaagaagctaatattttt 6055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 tctccgacgccaccgtgcggcgtcgtggcgcgatttaattttaaagaagctaatattttt 1860
Query: 6056 tatcgtatgat 6066
|||||||||||
Sbjct: 1861 tatcgtatgat 1871
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 75,862
Number of extensions: 9171
Number of successful extensions: 9171
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9165
Number of HSP's successfully gapped: 1
Length of query: 6403
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6385
Effective length of database: 8,109,745
Effective search space: 51780721825
Effective search space used: 51780721825
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)