BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12795 (UTR included)
(1531 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_444_C1 914 0.0
>BF14_444_C1
Length = 1224
Score = 914 bits (461), Expect = 0.0
Identities = 467/469 (99%)
Strand = Plus / Minus
Query: 1063 aatcatgtagcttgttttatttttaacaacaacaatattattatgtaaaatgtacaattc 1122
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 aatcatggagcttgttttatttttaacaacaacaatattattatgtaaaatgtacaattc 1132
Query: 1123 aattacagattatgtaaaagcaataatataaacgaattcatagacccgatgcaagtctat 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 aattacagattatgtaaaagcaataatataaacgaattcatagacccgatgcaagtctat 1072
Query: 1183 tcactatccaatggatcacaatatttgttcgggaatcgaaaatctcttgcttgtgatgcg 1242
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 tcactattcaatggatcacaatatttgttcgggaatcgaaaatctcttgcttgtgatgcg 1012
Query: 1243 cttacaaagatttcgccgattttaaaattcttactttgatccttacataatgtttacact 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 cttacaaagatttcgccgattttaaaattcttactttgatccttacataatgtttacact 952
Query: 1303 gaaagttaatcattacatgcttaatatcgttcaccctaaagctatatgtatattaattca 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 gaaagttaatcattacatgcttaatatcgttcaccctaaagctatatgtatattaattca 892
Query: 1363 cagagttccgtctgtcatcgctcaagctaagaaaccccaaacagccaaacgtaattgtaa 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 cagagttccgtctgtcatcgctcaagctaagaaaccccaaacagccaaacgtaattgtaa 832
Query: 1423 gagaacgaaacattcagccggcggcggttcagaacttaaataaaaaatggcatctagtaa 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gagaacgaaacattcagccggcggcggttcagaacttaaataaaaaatggcatctagtaa 772
Query: 1483 ctattgactggtaggaactttccgatcactaatgacgaacctataacgc 1531
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ctattgactggtaggaactttccgatcactaatgacgaacctataacgc 723
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,560
Number of extensions: 5687
Number of successful extensions: 5687
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5687
Number of HSP's successfully gapped: 1
Length of query: 1531
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1514
Effective length of database: 8,119,229
Effective search space: 12292512706
Effective search space used: 12292512706
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)