BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12815 (UTR included)
(3967 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055A2H12 1542 0.0
>BF01055A2H12
Length = 790
Score = 1542 bits (778), Expect = 0.0
Identities = 787/790 (99%)
Strand = Plus / Plus
Query: 514 aggaaacctattgtttgtgtggccaaccatataatattggtcaatttatgatagaatgtg 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaaacctattgtttgtgtggccaaccatataatattggtcaatttatgatagaatgtg 60
Query: 574 attgctgtcgcgagtggtttcatggaagctgtgttgatgttaaaatttaccattcggatg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgctgtcgcgagtggtttcatggaagctgtgttgatgttaaaatttaccattcggatg 120
Query: 634 atatagacaagtatcactgtccaaaatgtgcccagacttatggaccctcagttttgaaaa 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atatagacaagtatcactgtccaaaatgtgcccagacttatggaccctcagttttgaaaa 180
Query: 694 tcccaacaaacaatcaccgtgcggatcgctacgagcttggtgcggagacacgaccttcac 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcccaacaaacaatcaccgtgcggatcgctacgagcttggtgcggagacacgaccttcac 240
Query: 754 aagccggatcaccagcatgggtccgagcactgtccgctcggcccatgagacccacagccg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 aagccggatcaccagcatgggtccgagcactgtccgctcggcccatgagacccacggccg 300
Query: 814 cagctctaaccacaatgagacctgaacagtttaccgaggagtttgtcagagataatttgt 873
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagccctaaccacaatgagacctgaacagtttaccgaggagtttgtcagagataatttgt 360
Query: 874 tcacacgaccagtcatctttaatacctcagagggtcttgatatgaaggtgccgaatgcca 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcacacgaccagtcatctttaatacctcagagggtcttgatatgaaggtgccgaatgcca 420
Query: 934 atacatttaacgtaagatctgtgttacgatattgtggagctcagttagaggttgaggtta 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atacatttaacgtaagatctgtgttacgatattgtggagctcagttagaggttgaggtta 480
Query: 994 tagatgtacgtaagcagtccaccttacggatgccgctcggagattttgtggattactttg 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagatgtacgtaagcagtccaccttacggatgccgctcggagattttgtggattactttg 540
Query: 1054 agaccccacaggaacacagggatgagaaagtcctcaatgtacttagtctggagttcaccg 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaccccacaggaacacagggatgagaaagtcctcaatgtacttagtctggagttcaccg 600
Query: 1114 ataccaacatgtgtagtctagtggagccaccactgatcgctcgtagtctagactgggctc 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ataccaacatgtgtagtctagtggagccaccactgatcgctcgtagtctagactgggctc 660
Query: 1174 gaactgtatggtctagcgaggaaccggctagacctcacgtccaacgctactgtttaatgt 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaactgtatggtctagcgaggaaccggctagacctcacgtccaacgctactgtttaatgt 720
Query: 1234 cagcgtctggctcctatacagacttccacatagactttggtggtaccacagtctggtatc 1293
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 721 cagcgtctggctcctatacagacttccacatagactttggtggtaccacagtctggtacc 780
Query: 1294 acgtcctaca 1303
||||||||||
Sbjct: 781 acgtcctaca 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 424,404
Number of extensions: 13021
Number of successful extensions: 13021
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13021
Number of HSP's successfully gapped: 1
Length of query: 3967
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3949
Effective length of database: 8,109,745
Effective search space: 32025383005
Effective search space used: 32025383005
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)