BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12818 (UTR included)
(1485 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 123 9e-28
BF01037B1H08 101 3e-21
BF01056B1D02 96 2e-19
BF01062A1A05 86 2e-16
BF01031B1E12 82 3e-15
BF01040A1G09 78 5e-14
BF01052B1H02 78 5e-14
BF01010B2F09 70 1e-11
>BF01023A2A12
Length = 723
Score = 123 bits (62), Expect = 9e-28
Identities = 77/82 (93%)
Strand = Plus / Minus
Query: 1404 atcatcatcatcatcagcctattggagcccactgctgagcaaaggcctcatctcacatgg 1463
|||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||
Sbjct: 348 atcatcatcatcatcagcctatcggagctcactgctgagcaaaggcctcttatcacatgg 289
Query: 1464 agaaggttagagccttaatcac 1485
||||||||||||| ||||||||
Sbjct: 288 agaaggttagagcattaatcac 267
>BF01037B1H08
Length = 758
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 1407 atcatcatcatcagcctattggagcccactgctgagcaaaggcctcatctcacatggaga 1466
||||||| ||||||||||| ||||||||| |||||||||||||||| ||||||||| |||
Sbjct: 349 atcatcaccatcagcctatcggagcccacagctgagcaaaggcctcttctcacatgtaga 290
Query: 1467 aggttagagccttaa 1481
|||||||||| ||||
Sbjct: 289 aggttagagcattaa 275
>BF01056B1D02
Length = 778
Score = 95.6 bits (48), Expect = 2e-19
Identities = 71/78 (91%), Gaps = 3/78 (3%)
Strand = Plus / Minus
Query: 1404 atcatcatcatcatcagcctattggagcccactgctgagcaaaggcctcatctcacatgg 1463
|||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 746 atcatcattatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacat-- 689
Query: 1464 agaaggttagagccttaa 1481
|||||||||||| ||||
Sbjct: 688 -gaaggttagagcattaa 672
>BF01062A1A05
Length = 777
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 1427 ggagcccactgctgagcaaaggcctcatctcacatggagaaggttagagccttaatcac 1485
||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 586 ggagcccactgctaagcaaaggcctcttctcacaaggagaaggttagagcattaatcac 528
>BF01031B1E12
Length = 730
Score = 81.8 bits (41), Expect = 3e-15
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 1409 catcatcatcagcctattggagcccactgctgagcaaaggcctcatctcacatggagaag 1468
||||||||| ||||||| |||||||||||||||||||| || | ||||||| |||||||
Sbjct: 216 catcatcataagcctatcggagcccactgctgagcaaa-tccccttctcacacggagaag 158
Query: 1469 gttagagccttaatcac 1485
|||||||| ||||||||
Sbjct: 157 gttagagcattaatcac 141
>BF01040A1G09
Length = 753
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 1405 tcatcatcatcatcagcctattggagcccactgctgagcaaaggcctcatctcacatgga 1464
||||||||||||||||||||| ||| ||||||||||||| | ||||| |||| ||||||
Sbjct: 139 tcatcatcatcatcagcctatcggaagccactgctgagcataagcctcttctcgcatgga 80
Query: 1465 gaaggtt 1471
|||||||
Sbjct: 79 gaaggtt 73
>BF01052B1H02
Length = 790
Score = 77.8 bits (39), Expect = 5e-14
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 1395 atcatcatcatcatcatcatcatcagcctattggagcccactgctgagcaaaggcctcat 1454
|||||||||||||||| |||||| |||| || |||||||||| |||||||| |||| |
Sbjct: 254 atcatcatcatcatcaccatcattagcccatcagagcccactgttgagcaaacgcctttt 313
Query: 1455 ctcacatggagaaggttagagccttaa 1481
||| ||||||||| |||||||| ||||
Sbjct: 314 ctcccatggagaaagttagagcattaa 340
>BF01010B2F09
Length = 764
Score = 69.9 bits (35), Expect = 1e-11
Identities = 70/81 (86%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 1405 tcatcatcatcatcagcctattggagcccactgctgagcaaaggcctcatctcacatgga 1464
|||||||||||| |||||| | ||||||| | |||||| |||| || |||||||||||
Sbjct: 260 tcatcatcatcaccagcctgtcggagcccgccgctgag---aggcgtcttctcacatgga 316
Query: 1465 gaaggttagagccttaatcac 1485
|||||||||||| ||||||||
Sbjct: 317 gaaggttagagcattaatcac 337
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 184,581
Number of extensions: 4325
Number of successful extensions: 4325
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 4318
Number of HSP's successfully gapped: 8
Length of query: 1485
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1468
Effective length of database: 8,119,229
Effective search space: 11919028172
Effective search space used: 11919028172
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)