BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12822 (UTR included)
(2008 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A2F09 281 2e-75
BF14_335_C2 113 1e-24
BF01019A1H08 111 4e-24
BF01049B1F01 107 7e-23
BF14_335_C4 96 3e-19
BF14_335_C5 92 4e-18
BF01014B2F02 90 2e-17
BF01016A2B02 84 1e-15
BF01016B1E06 78 6e-14
BF01044B1A07 70 1e-11
BF01045B1A06 68 6e-11
>BF01053A2F09
Length = 557
Score = 281 bits (142), Expect = 2e-75
Identities = 273/316 (86%), Gaps = 8/316 (2%)
Strand = Plus / Minus
Query: 1701 ggttaaaaagatattttattaaagaaaaaaaggaaaggttaggggaagtagcaagatctt 1760
|||||||||||| |||| ||||| |||||||||||||||| ||||||||| |||||| ||
Sbjct: 557 ggttaaaaagatttttttttaaataaaaaaaggaaaggttgggggaagtaccaagatttt 498
Query: 1761 ggaactgatggtgtctcgaacaattt----atatatatatatatatata----ttacaat 1812
||||||| ||||| |||| |||||| ||||||||||||||||||| ||| |||
Sbjct: 497 agaactgagggtgtttcgaccaatttttatatatatatatatatatatatattttaaaat 438
Query: 1813 aactattttccttgtaaaatatattaattcaattctcgctgtgatttatttcgtctacgt 1872
|||| |||||||||||||||||||||||||||||||||| | ||||||||| || |||||
Sbjct: 437 aacttttttccttgtaaaatatattaattcaattctcgcggggatttattttgtttacgt 378
Query: 1873 actgatgttcgtaatgcatttaccgtgatctcaagcgttccttagattacaaactaatta 1932
||||||||| |||| |||||| ||| ||| ||||| |||||||||||| |||||||||||
Sbjct: 377 actgatgtttgtaaagcatttcccgggatttcaagggttccttagattccaaactaatta 318
Query: 1933 ttttactttaagaggtgtgtgactattatattactaacgcgtttgcttggttgtgtgtgt 1992
||||||||||| || | | ||||||||||||||| ||| |||| |||||| | | | ||
Sbjct: 317 gtttactttaaggggggggggactattatattacttacgggtttccttggtggggggggt 258
Query: 1993 attaattatatatata 2008
||||||||||||||||
Sbjct: 257 attaattatatatata 242
>BF14_335_C2
Length = 1827
Score = 113 bits (57), Expect = 1e-24
Identities = 81/88 (92%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 64 gggctcttaaacctacacccgggtcgcaagtcccaggcactgttgaagctcctctccctg 123
||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||
Sbjct: 927 gggctcttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctg 868
Query: 124 caa--cgacggacccgccacccgcacgg 149
||| || |||||||| |||||||||||
Sbjct: 867 caacgcggcggacccggcacccgcacgg 840
>BF01019A1H08
Length = 504
Score = 111 bits (56), Expect = 4e-24
Identities = 77/83 (92%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 69 cttaaacctacacccgggtcgcaagtcccaggcactgttgaagctcctctccctgcaa-- 126
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 478 cttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacg 419
Query: 127 cgacggacccgccacccgcacgg 149
||| ||||||| |||||||||||
Sbjct: 418 cgatggacccggcacccgcacgg 396
>BF01049B1F01
Length = 840
Score = 107 bits (54), Expect = 7e-23
Identities = 60/62 (96%)
Strand = Plus / Minus
Query: 69 cttaaacctacacccgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 128
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 cttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 587
Query: 129 ac 130
||
Sbjct: 586 ac 585
>BF14_335_C4
Length = 1491
Score = 95.6 bits (48), Expect = 3e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 69 cttaaacctacacccgggtcgcaagtcccaggcactgttgaagctcctctcc 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1251 cttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 1302
>BF14_335_C5
Length = 1597
Score = 91.7 bits (46), Expect = 4e-18
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 69 cttaaacctacacccgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 128
||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 1499 cttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaaag 1558
Query: 129 acggacccgccacccgcacgg 149
| | ||||| |||||||||||
Sbjct: 1559 atgcacccggcacccgcacgg 1579
>BF01014B2F02
Length = 623
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 77 tacacccgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacgacggaccc 136
|||||| ||||||||||||| |||| ||| |||||||||||||||||||||| ||||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggaccc 564
Query: 137 gccacccgcacgg 149
| |||||||||||
Sbjct: 563 ggcacccgcacgg 551
>BF01016A2B02
Length = 780
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 67 ctcttaaacctacacccgggtcgcaagtcccaggcactgttgaagctcctctccctgcaa 126
||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 285 ctcttaagcctacacctgagtcgcaattcccaggcactgttgaagctcctctcccttcaa 226
Query: 127 cg 128
||
Sbjct: 225 cg 224
>BF01016B1E06
Length = 606
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 69 cttaaacctacacccgggtcgcaagtcccaggcactgttgaagctcctctccctgcaac 127
|||||||||||||| ||||||| | |||| ||||||||||||||||||||| |||||||
Sbjct: 251 cttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctctgcaac 193
>BF01044B1A07
Length = 806
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 78 acacccgggtcgcaagtcccaggcactgttgaagctcctctccctgcaa--cgacggacc 135
||||| || |||| |||||||| ||| |||||||||||||||||||| | ||| |||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 136 cgccacccgcacgg 149
||||||||||||||
Sbjct: 472 cgccacccgcacgg 459
>BF01045B1A06
Length = 820
Score = 67.9 bits (34), Expect = 6e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 90 caagtcccaggcactgttgaagctcctctccctgcaac 127
||||||| ||||||||||||||||||||||||||||||
Sbjct: 748 caagtccaaggcactgttgaagctcctctccctgcaac 711
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,670
Number of extensions: 11905
Number of successful extensions: 11905
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 11895
Number of HSP's successfully gapped: 11
Length of query: 2008
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1991
Effective length of database: 8,119,229
Effective search space: 16165384939
Effective search space used: 16165384939
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)