BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12826 (UTR included)
(2461 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A2G01 234 5e-61
BF14_1087_C1 88 8e-17
>BF01019A2G01
Length = 244
Score = 234 bits (118), Expect = 5e-61
Identities = 130/134 (97%)
Strand = Plus / Minus
Query: 2180 ttatatatatataattttatttttgcataagcactgatagacaagtgagtggctggcaag 2239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttatatatatataattttatttttgcataagcactgatagacaagtgagtggctggcaag 164
Query: 2240 gttagtgtgctcatacagggaggacgtagtcaccgacgagtgcataaatcgtaataatta 2299
|||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 163 gttagtgtgctcatacagggagagcgtagtcaccgacgtgtgcataaatcgtaataatta 104
Query: 2300 catcaaaagacatt 2313
|||||||| |||||
Sbjct: 103 catcaaaatacatt 90
Score = 103 bits (52), Expect = 1e-21
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 2323 tttttgttggacatgggaatttttcatttatttaaacattacaaaaattaattcccaagt 2382
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 60 tttttgttggacatggcaatttttcatttatttaaacattagaaaaattaattcccaagt 1
>BF14_1087_C1
Length = 1743
Score = 87.7 bits (44), Expect = 8e-17
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 2417 ctaatacaagacacaggacagacatacattaatatatttctcaa 2460
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 ctaatacaagacacaggacagacatacattaatatatttctcaa 1700
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 290,895
Number of extensions: 10314
Number of successful extensions: 10314
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10314
Number of HSP's successfully gapped: 3
Length of query: 2461
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2444
Effective length of database: 8,119,229
Effective search space: 19843395676
Effective search space used: 19843395676
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)