BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12839 (UTR included)
(2302 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 161 6e-39
BF14_335_C2 125 3e-28
BF01049B1F01 109 2e-23
BF14_335_C4 101 5e-21
BF01016B1E06 92 5e-18
BF01016A2B02 90 2e-17
BF01014B2F02 88 7e-17
BF01044B1A07 84 1e-15
BF14_335_C5 74 1e-12
BF01043B1E03 70 2e-11
>BF01019A1H08
Length = 504
Score = 161 bits (81), Expect = 6e-39
Identities = 118/129 (91%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 914 gagacgaaacttcttagcattcaatggatccatcgtgcgggtgccgt-tccgtcgcgttg 972
|||| ||||| |||||||||||||||||| || ||||||||||||| ||| ||||||||
Sbjct: 364 gagatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttg 423
Query: 973 cagggagaggatcttcaacagtgcctgggacttgcgacccaggtgtaggttcaaggggcg 1032
||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 424 cagggagaggagcttcaacagtgcctgggagttgcgacccaggtgtaggtttaaggggct 483
Query: 1033 cctatctaa 1041
|||||||||
Sbjct: 484 cctatctaa 492
>BF14_335_C2
Length = 1827
Score = 125 bits (63), Expect = 3e-28
Identities = 100/111 (90%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 914 gagacgaaacttcttagcattcaatggatccatcgtgcgggtgccgt-tccgtcgcgttg 972
|||||||||| ||||||| ||| |||||| || ||||||||||||| |||| |||||||
Sbjct: 808 gagacgaaacctcttagctttctatggattcaccgtgcgggtgccgggtccgccgcgttg 867
Query: 973 cagggagaggatcttcaacagtgcctgggacttgcgacccaggtgtaggtt 1023
||||||||||| |||||||||||||||||| ||||||| ||||||||||||
Sbjct: 868 cagggagaggagcttcaacagtgcctgggatttgcgacacaggtgtaggtt 918
>BF01049B1F01
Length = 840
Score = 109 bits (55), Expect = 2e-23
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 968 cgttgcagggagaggatcttcaacagtgcctgggacttgcgacccaggtgtaggttcaag 1027
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtgtaag 646
Query: 1028 gggcgcctatctaac 1042
|||| ||||||||||
Sbjct: 647 gggc-cctatctaac 660
>BF14_335_C4
Length = 1491
Score = 101 bits (51), Expect = 5e-21
Identities = 64/67 (95%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 965 tcgcgttgcagggagaggatcttcaacagtgcctgggacttgcgacccaggtgtaggttc 1024
|||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1312 tcgcgttgcagg-agaggagcttcaacagtgcctgggacttgcgacccaggtgtaggttt 1254
Query: 1025 aaggggc 1031
|||||||
Sbjct: 1253 aaggggc 1247
>BF01016B1E06
Length = 606
Score = 91.7 bits (46), Expect = 5e-18
Identities = 86/97 (88%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 969 gttgcagggagaggatcttcaacagtgcctgggacttgcgacccaggtgtaggttcaagg 1028
||||||| ||||||| ||||||||||||| |||| | |||||||||||||||||| ||||
Sbjct: 193 gttgcagagagaggagcttcaacagtgccggggagtagcgacccaggtgtaggtttaagg 252
Query: 1029 ggcgcctatctaacatgcgttgatcgctcacctccac 1065
||| |||||||||| ||||| | |||||||||||||
Sbjct: 253 ggc-cctatctaac--gcgttaaacgctcacctccac 286
>BF01016A2B02
Length = 780
Score = 89.7 bits (45), Expect = 2e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 966 cgcgttgcagggagaggatcttcaacagtgcctgggacttgcgacccaggtgtaggttca 1025
||||||| |||||||||| |||||||||||||||||| ||||||| |||||||||| | |
Sbjct: 222 cgcgttgaagggagaggagcttcaacagtgcctgggaattgcgactcaggtgtaggctta 281
Query: 1026 aggggcgcctatctaac 1042
|| ||| ||||||||||
Sbjct: 282 agaggcccctatctaac 298
>BF01014B2F02
Length = 623
Score = 87.7 bits (44), Expect = 7e-17
Identities = 93/107 (86%), Gaps = 3/107 (2%)
Strand = Plus / Plus
Query: 914 gagacgaaacttcttagcattcaatggatccatcgtgcgggtgccgt-tccgtcgcgttg 972
|||||||||| ||| |||||||| ||||| || ||||||||||||| ||| ||||||
Sbjct: 519 gagacgaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtcca--gcgttg 576
Query: 973 cagggagaggatcttcaacagtgcctgggacttgcgacccaggtgta 1019
||||||||||| ||||| ||| |||| ||||||||||||||||||||
Sbjct: 577 cagggagaggagcttcagcagcgcctaggacttgcgacccaggtgta 623
>BF01044B1A07
Length = 806
Score = 83.8 bits (42), Expect = 1e-15
Identities = 88/102 (86%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 918 cgaaacttcttagcattcaatggatccatcgtgcgggtgccgt-tccgtcgcgttgcagg 976
|||||||||| ||| |||||||||| || |||||||||| || ||| |||||| |||||
Sbjct: 431 cgaaacttctcagcgttcaatggattcaccgtgcgggtggcgggtccatcgcgtggcagg 490
Query: 977 gagaggatcttcaacagtgcctgggacttgcgacccaggtgt 1018
||||||| ||||||| ||| |||||||| |||| ||||||||
Sbjct: 491 gagaggagcttcaactgtgtctgggactcgcgaaccaggtgt 532
>BF14_335_C5
Length = 1597
Score = 73.8 bits (37), Expect = 1e-12
Identities = 80/96 (83%)
Strand = Plus / Minus
Query: 970 ttgcagggagaggatcttcaacagtgcctgggacttgcgacccaggtgtaggttcaaggg 1029
||||| |||||||| ||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 1556 ttgcacggagaggagcttcaacagtgcctgggacttgcgannnnngtgtaggtttaaggc 1497
Query: 1030 gcgcctatctaacatgcgttgatcgctcacctccac 1065
|| ||| |||||| || || | |||||||||||||
Sbjct: 1496 gcccctgtctaacgcgcattaaacgctcacctccac 1461
>BF01043B1E03
Length = 830
Score = 69.9 bits (35), Expect = 2e-11
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 968 cgttgcagggagaggatcttcaacagtgcctgggacttgcgacccaggtgtaggttcaag 1027
|||||| ||||||||| | ||| ||||| |||||||||| |||||||| |||||| ||
Sbjct: 454 cgttgctgggagaggaggtccaatagtgcttgggacttgcaacccaggtataggtttaaa 395
Query: 1028 gggcgcctatctaacatgcgttgatcgctcacctccact 1066
|||| |||||||||| ||||| | |||||||||||||
Sbjct: 394 gggcccctatctaacgcgcgttaagtgctcacctccact 356
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 351,515
Number of extensions: 8913
Number of successful extensions: 8913
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 8909
Number of HSP's successfully gapped: 10
Length of query: 2302
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2285
Effective length of database: 8,119,229
Effective search space: 18552438265
Effective search space used: 18552438265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)