BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12848 (UTR included)
(2491 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 141 6e-33
BF01037B1H08 125 4e-28
BF01056B1D02 121 6e-27
BF01031B1E12 115 3e-25
BF01040A1G09 109 2e-23
BF01062A1A05 105 3e-22
BF01052B1H02 101 5e-21
BF01010B2F09 94 1e-18
>BF01023A2A12
Length = 723
Score = 141 bits (71), Expect = 6e-33
Identities = 98/107 (91%)
Strand = Plus / Plus
Query: 304 aaatcaccaacccgccttgagcaagcgtggtgattaatgctctagccttctccatgtgag 363
|||||||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 238 aaatcaccaatcagccttgagcgagcgtggtgattaatgctctaaccttctccatgtgat 297
Query: 364 aagaggcctctgctcagcagtggggtctgataggctgatgatgatga 410
||||||||| |||||||||||| | || |||||||||||||||||||
Sbjct: 298 aagaggcctttgctcagcagtgagctccgataggctgatgatgatga 344
>BF01037B1H08
Length = 758
Score = 125 bits (63), Expect = 4e-28
Identities = 96/107 (89%)
Strand = Plus / Plus
Query: 304 aaatcaccaacccgccttgagcaagcgtggtgattaatgctctagccttctccatgtgag 363
||||| ||| |||| ||||||||||||||||| ||||||||||| |||||| ||||||||
Sbjct: 242 aaatcgccaccccgtcttgagcaagcgtggtgcttaatgctctaaccttctacatgtgag 301
Query: 364 aagaggcctctgctcagcagtggggtctgataggctgatgatgatga 410
||||||||| |||||||| ||||| || |||||||||||| ||||||
Sbjct: 302 aagaggcctttgctcagctgtgggctccgataggctgatggtgatga 348
>BF01056B1D02
Length = 778
Score = 121 bits (61), Expect = 6e-27
Identities = 96/107 (89%), Gaps = 3/107 (2%)
Strand = Plus / Plus
Query: 304 aaatcaccaacccgccttgagcaagcgtggtgattaatgctctagccttctccatgtgag 363
||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 639 aaatcgccaacccgtcttgagcaagcgtggtggttaatgctctaaccttc---atgtgag 695
Query: 364 aagaggcctctgctcagcagtggggtctgataggctgatgatgatga 410
||||||||| |||||||||||||| || |||||||||||||| ||||
Sbjct: 696 aagaggcctttgctcagcagtgggctccgataggctgatgataatga 742
>BF01031B1E12
Length = 730
Score = 115 bits (58), Expect = 3e-25
Identities = 95/106 (89%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 304 aaatcaccaacccgccttgagcaagcgtggtgattaatgctctagccttctccatgtgag 363
||||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 112 aaatcgccaacccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgtgag 171
Query: 364 aagaggcctctgctcagcagtggggtctgataggctgatgatgatg 409
||| || | |||||||||||||| || |||||||| |||||||||
Sbjct: 172 aag-gggatttgctcagcagtgggctccgataggcttatgatgatg 216
>BF01040A1G09
Length = 753
Score = 109 bits (55), Expect = 2e-23
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 304 aaatcaccaacccgccttgagcaagcgtggtgattaatgctctagccttctccatgtgag 363
||||| ||||||| ||||||||||||||| |||||||||| | ||||||||||| |||
Sbjct: 30 aaatcgccaacccatcttgagcaagcgtggcgattaatgcttaaaccttctccatgcgag 89
Query: 364 aagaggcctctgctcagcagtggggtctgataggctgatgatgatga 410
||||||| | ||||||||||||| || |||||||||||||||||||
Sbjct: 90 aagaggcttatgctcagcagtggcttccgataggctgatgatgatga 136
>BF01062A1A05
Length = 777
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 319 cttgagcaagcgtggtgattaatgctctagccttctccatgtgagaagaggcctctgctc 378
||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||
Sbjct: 514 cttgagcaagcgtggtgattaatgctctaaccttctccttgtgagaagaggcctttgctt 573
Query: 379 agcagtggg 387
|||||||||
Sbjct: 574 agcagtggg 582
>BF01052B1H02
Length = 790
Score = 101 bits (51), Expect = 5e-21
Identities = 90/103 (87%)
Strand = Plus / Minus
Query: 304 aaatcaccaacccgccttgagcaagcgtggtgattaatgctctagccttctccatgtgag 363
||||| |||||||| ||||||||||||||||| ||||||||||| | ||||||||| |||
Sbjct: 373 aaatcgccaacccgtcttgagcaagcgtggtgcttaatgctctaactttctccatgggag 314
Query: 364 aagaggcctctgctcagcagtggggtctgataggctgatgatg 406
|| |||| | |||||| ||||||| |||||| |||| ||||||
Sbjct: 313 aaaaggcgtttgctcaacagtgggctctgatgggctaatgatg 271
>BF01010B2F09
Length = 764
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 304 aaatcaccaacccgccttgagcaagcgtggtgattaatgctctagccttctccatgtgag 363
||||| |||| ||| ||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 366 aaatcgccaatccgtcttgagcgagcgtggtgattaatgctctaaccttctccatgtgag 307
Query: 364 aagaggcctct 374
|||| ||||||
Sbjct: 306 aagacgcctct 296
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,222
Number of extensions: 5983
Number of successful extensions: 5983
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 5981
Number of HSP's successfully gapped: 8
Length of query: 2491
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2474
Effective length of database: 8,119,229
Effective search space: 20086972546
Effective search space used: 20086972546
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)