BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN12850 (UTR included)
         (1276 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01029B1G09                                                          115   2e-25

>BF01029B1G09
          Length = 784

 Score =   bits (58), Expect = 2e-25
 Identities = 201/243 (82%), Gaps = 8/243 (3%)
 Strand = Plus / Minus

                                                                        
Query: 928  tcgtaacgcgcgttggtgtgatagtttagtcgttagtagattttagaagtgtgtttaaat 987
            ||||||||||||||||||||| || ||| ||| | ||||||||| | |||||  ||||||
Sbjct: 585  tcgtaacgcgcgttggtgtgaaagattaatcgatcgtagattttcggagtgt--ttaaat 528

                                                                        
Query: 988  ctttcgattgtgttatattcggatttcatttaacgattagtttaaatcaagatagttgaa 1047
            |||||| |||||||||  || |||||||| | | ||| |||||||||| |||  ||||||
Sbjct: 527  ctttcgtttgtgttat--tcagatttcatctcaagataagtttaaatcgagacggttgaa 470

                                                                        
Query: 1048 agttattcatttagaattg-tttttatttttgtgtaaatttaataaattagcggtggaat 1106
            ||||||| | ||| ||||| |||||| ||||||||  |||||||||||||   ||| |||
Sbjct: 469  agttattaaattaaaattgttttttagttttgtgt-tatttaataaattattagtgaaat 411

                                                                        
Query: 1107 tgtatcgaatgttattttttaaaaaagtcaattcttaccttgtttctaagaatatatata 1166
            |||||||||| |||  ||| ||||||||| ||||| | || || ||||||  ||||||||
Sbjct: 410  tgtatcgaatatta--tttaaaaaaagtcgattctgatctagtgtctaagtgtatatata 353

               
Query: 1167 tat 1169
            |||
Sbjct: 352  tat 350


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 155,039
Number of extensions: 11999
Number of successful extensions: 11999
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11995
Number of HSP's successfully gapped: 1
Length of query: 1276
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1259
Effective length of database: 8,119,229
Effective search space: 10222109311
Effective search space used: 10222109311
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)