BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12861 (UTR included)
(1597 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A1A08 906 0.0
BF01010A2E10 692 0.0
BF01017A2A12 72 3e-12
>BF01024A1A08
Length = 682
Score = 906 bits (457), Expect = 0.0
Identities = 472/477 (98%)
Strand = Plus / Plus
Query: 432 cggacgtgtcgcgggttcttaccgacgatattaatacattataacacgcagtgcattcgt 491
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 cggacgtgtcgcgggttcttaccgacgatattaatatattataacacgcagtgcattcgt 60
Query: 492 gtcgcaaacatgttagagccgatgagtgcgtctgcggtaaacgaactcgaatcgtgggtg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcgcaaacatgttagagccgatgagtgcgtctgcggtaaacgaactcgaatcgtgggtg 120
Query: 552 gaactgaattcgggtgttctgtctggagagaatgagtacatcaaactgttgcgcgaggct 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaactgaattcgggtgttctgtctggagagaatgagtacatcaaactgttgcgcgaggct 180
Query: 612 cagagggagagtcgagactcgtcggtcaggcactcgagggcttccagtgttaagggcagt 671
|| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 caaagggagagtcgggactcgtcggtcaggcactcgagggcctccagtgttaagggcagt 240
Query: 672 ccgaaatcaccaccgaacagtcccaacttggagccgtccactgaggatgagatgaagggc 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgaaatcaccaccgaacagtcccaacttggagccgtccactgaggatgagatgaagggc 300
Query: 732 gtctacatcaactgttggagggacgactccaacgactgggtgtgggagtggagcagccgc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtctacatcaactgttggagggacgactccaacgactgggtgtgggagtggagcagccgc 360
Query: 792 ccggaccagctgccgcccaaggactggcgtttcaaacacccccagccggtcagaggtcca 851
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccggaccagatgccgcccaaggactggcgtttcaaacacccccagccggtcagaggtcca 420
Query: 852 ccttcagccagctcctccatcgaggtgttggagcaactggcaccggccatgacacag 908
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccttcagccagctcctccatcgaggtgttggagcaactggcaccggccatgacacag 477
Score = 367 bits (185), Expect = e-101
Identities = 201/205 (98%), Gaps = 1/205 (0%)
Strand = Plus / Plus
Query: 939 agtcactgcctgtccgtgcgccgagcctgtctgttcagtcgcggagccctggccgctgtg 998
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 478 agtcactgcctgtccgtgcgccgagcctgcctgttcagtcgcggagccctggccgctgtg 537
Query: 999 ctgatcacaaacgtcgtgtcactgctggtgggggctggcattggagtgtggctcagcaag 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ctgatcacaaacgtcgtgtcactgctggtgggggctggcattggagtgtggctcagcaag 597
Query: 1059 cgcggcatgctgccccccagactggtggttccctgctaatgattcgagatagcgttgtaa 1118
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 598 cgcggcatgctgccccccagactggtggtgccctgctaatgattcgagatagcgttgtaa 657
Query: 1119 aactgg-aaaaaaaacattatattt 1142
||| || ||||||||||||||||||
Sbjct: 658 aacaggaaaaaaaaacattatattt 682
>BF01010A2E10
Length = 827
Score = 692 bits (349), Expect = 0.0
Identities = 364/369 (98%)
Strand = Plus / Plus
Query: 540 gaatcgtgggtggaactgaattcgggtgttctgtctggagagaatgagtacatcaaactg 599
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gaatcgtgggtggagctgaattcgggtgttctgtctggagagaatgagtacatcaaactg 225
Query: 600 ttgcgcgaggctcagagggagagtcgagactcgtcggtcaggcactcgagggcttccagt 659
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 226 ttgcgcgaggctcagagggagagtcgggactcgtcggtcaggcactcgagggcctccagt 285
Query: 660 gttaagggcagtccgaaatcaccaccgaacagtcccaacttggagccgtccactgaggat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gttaagggcagtccgaaatcaccaccgaacagtcccaacttggagccgtccactgaggat 345
Query: 720 gagatgaagggcgtctacatcaactgttggagggacgactccaacgactgggtgtgggag 779
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 346 gagatgaagggcgtctacatcaactgctggagggacgactccaacgactgggtgtgggag 405
Query: 780 tggagcagccgcccggaccagctgccgcccaaggactggcgtttcaaacacccccagccg 839
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tggagcagccgcccggaccagatgccgcccaaggactggcgtttcaaacacccccagccg 465
Query: 840 gtcagaggtccaccttcagccagctcctccatcgaggtgttggagcaactggcaccggcc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gtcagaggtccaccttcagccagctcctccatcgaggtgttggagcaactggcaccggcc 525
Query: 900 atgacacag 908
|||||||||
Sbjct: 526 atgacacag 534
Score = 502 bits (253), Expect = e-141
Identities = 285/293 (97%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 939 agtcactgcctgtccgtgcgccgagcctgtctgttcagtcgcggagccctggccgctgtg 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agtcactgcctgtccgtgcgccgagcctgtctgttcagtcgcggagccctggccgctgtg 594
Query: 999 ctgatcacaaacgtcgtgtcactgctggtgggggctggcattggagtgtggctcagcaag 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ctgatcacaaacgtcgtgtcactgctggtgggggctggcattggagtgtggctcagcaag 654
Query: 1059 cgcggcatgctgccccccagactggtggttccctgctaatgattcgagatagcgttgtaa 1118
||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||
Sbjct: 655 cgcggcatgctgccccccagactggtggtcccctgctaataactcgagatagcgttgtaa 714
Query: 1119 aactgg-aaaaaaaacattatattttatcaaaaac-aaaaaaaaacatgtaattttccct 1176
||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 715 aacaggaaaaaaaaacattatattttatcaaaaacaaaaaaaaaacatgtaattttccct 774
Query: 1177 cgtcgtgtttatttcaatgttacggatgtgtcggatgtctcgcgtgtctgttg 1229
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 775 cgtcgtgtttatttcaatgttacggatgtgtcggatctctcgcgcgtctgttg 827
>BF01017A2A12
Length = 432
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1558 tttaacgtctaggaggatattccatacatagattaaatta 1597
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 8 tttaacgtctaggaggatattccatacacagattaaatta 47
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,557
Number of extensions: 6570
Number of successful extensions: 6570
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6566
Number of HSP's successfully gapped: 5
Length of query: 1597
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1580
Effective length of database: 8,119,229
Effective search space: 12828381820
Effective search space used: 12828381820
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)