BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12867 (UTR included)
(1360 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032B2B05 450 e-126
BF14_2209_C1 70 1e-11
>BF01032B2B05
Length = 606
Score = 450 bits (227), Expect = e-126
Identities = 230/231 (99%)
Strand = Plus / Plus
Query: 512 ggctgcggaaggtggtctcgctccaaatggcgatgatatgccagttgggggtcctaagac 571
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 376 ggctgcggaaggtggtctcgctccaaatggcgatgatatgccagtggggggtcctaagac 435
Query: 572 accccagcagatagcagcacaacgccgcttgcaacaaacgcaggctcaggttgatgaggt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 accccagcagatagcagcacaacgccgcttgcaacaaacgcaggctcaggttgatgaggt 495
Query: 632 tgttgacataatgaaaacgaacgttgaaaaggtgttggagagagatcaaaagctctcgga 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgttgacataatgaaaacgaacgttgaaaaggtgttggagagagatcaaaagctctcgga 555
Query: 692 gcttgacgacagagcagatgccttgcagcaaggtgcttcgcagtttgaaca 742
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gcttgacgacagagcagatgccttgcagcaaggtgcttcgcagtttgaaca 606
>BF14_2209_C1
Length = 963
Score = 69.9 bits (35), Expect = 1e-11
Identities = 116/143 (81%)
Strand = Plus / Plus
Query: 657 gaaaaggtgttggagagagatcaaaagctctcggagcttgacgacagagcagatgccttg 716
|||||||| || || ||||||||||| ||||| || || ||| ||||||| ||||| |||
Sbjct: 178 gaaaaggttttagaaagagatcaaaaactctccgaactagacaacagagctgatgcattg 237
Query: 717 cagcaaggtgcttcgcagtttgaacaacaggctggaaaactgaaaagcaaattctggctg 776
||||| |||||| | || |||||||| || ||||| || || ||||| |||| ||| |
Sbjct: 238 cagcatggtgctgctcaatttgaacagcaagctggtaagcttaaaaggaaatattggtgg 297
Query: 777 cagaacctaaagatgatgataat 799
|||||||| || |||||| ||||
Sbjct: 298 cagaacctgaaaatgatgttaat 320
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 198,054
Number of extensions: 3997
Number of successful extensions: 3997
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3997
Number of HSP's successfully gapped: 2
Length of query: 1360
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1343
Effective length of database: 8,119,229
Effective search space: 10904124547
Effective search space used: 10904124547
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)