BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12870 (UTR included)
(2860 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A1B12 1086 0.0
BF01053B2D09 1027 0.0
>BF01010A1B12
Length = 856
Score = 1086 bits (548), Expect = 0.0
Identities = 592/610 (97%), Gaps = 15/610 (2%)
Strand = Plus / Plus
Query: 1164 gttgggaatctggaagaagagagttcaagcaagaagggaggttcacagaaggagtcacag 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gttgggaatctggaagaagagagttcaagcaagaagggaggttcacagaaggagtcacag 306
Query: 1224 cagcaagacagaagaattgacatccaaccagctgaagatgaagacgatcaggacgagggt 1283
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 307 cagcaagacagaagaattgacatccaaccagctgaagatgaagatgatcaggacgagggt 366
Query: 1284 ctgtcagtgaagcacgtggcttacgcccgctatcttcgtaatcaccgtctcatcaacgag 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ctgtcagtgaagcacgtggcttacgcccgctatcttcgtaatcaccgtctcatcaacgag 426
Query: 1344 attttctccgacacggtggtgccagatgtaaggtcggtggtcaccaccgctaggatgcag 1403
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 427 atcttctccgacacggtggtgccggatgtaaggtcggtggtcaccaccgctaggatgcag 486
Query: 1404 attttaaagaagcaggtacaatcgctgacgatgcatcagaagaaattggaagacgaactt 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 attttaaagaagcaggtacaatcgctgacgatgcatcagaagaaattggaagacgaactt 546
Query: 1464 caacaaattgaagagaagtttgaagcaaagaaaaggaagttcatagagagcagcgagtcc 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 caacaaattgaagagaagtttgaagcaaagaaaaggaagttcatagagagcagcgagtcc 606
Query: 1524 ttccaggaggagttgaagaagcattgtaagccagcggtggacgacgagacgttcgctaga 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttccaggaggagttgaagaagcattgtaagccagcggtggacgacgagacgttcgctaga 666
Query: 1584 atggtggagcgagcggtcgatcagcagagaaggggtgctgctggaccacacccacacccg 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atggtggagcgagcggtcgatcagcagagaaggggtgctgctggaccacacccacacccg 726
Query: 1644 aatcaccca---------------cacccctcgcaccctcacgcgactcaccctacgcat 1688
||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 727 aatcacccacacccctcgcaccctcacccctcgcaccctcacgcgactcaccctacgcat 786
Query: 1689 ccttcacacccgacacatccccaccacacggcaccacaacacgctcagccggcacaccct 1748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ccttcacacccgacacatccccaccacacggcaccacaacacgctcagccggcacaccct 846
Query: 1749 cggcctcatg 1758
||||||||||
Sbjct: 847 cggcctcatg 856
Score = 490 bits (247), Expect = e-138
Identities = 247/247 (100%)
Strand = Plus / Plus
Query: 828 gaaaagccgcttatgccatacatgagatattcaagaagggtttgggacagtgtgaaggca 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaaagccgcttatgccatacatgagatattcaagaagggtttgggacagtgtgaaggca 60
Query: 888 gcaaacccagatctaaagctatgggaaatcggcagaattatcggtggtatgtggagagat 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaaacccagatctaaagctatgggaaatcggcagaattatcggtggtatgtggagagat 120
Query: 948 ctgccccagtcagaaaagtatgcttttgtggatgaatacgaagctgagaaggcgcagtac 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgccccagtcagaaaagtatgcttttgtggatgaatacgaagctgagaaggcgcagtac 180
Query: 1008 acagaaatgttgaaagcataccaatcatcgcccgcatacttacagtggctggctcacaaa 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acagaaatgttgaaagcataccaatcatcgcccgcatacttacagtggctggctcacaaa 240
Query: 1068 aacaaag 1074
|||||||
Sbjct: 241 aacaaag 247
>BF01053B2D09
Length = 724
Score = 1027 bits (518), Expect = 0.0
Identities = 564/577 (97%), Gaps = 3/577 (0%)
Strand = Plus / Plus
Query: 2284 attcacaccacccacagcaccccgctcatcatgacgttaagcctgaggaaccgccggcca 2343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attcacaccacccacagcaccccgctcatcatgacgttaagcctgaggaaccgccggcca 60
Query: 2344 agaaggagtccgaatgattgtcaccgaaacgcgtcgttaaacggcgcaggaagtcatcgt 2403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaggagtccgaatgattgtcaccgaaacgcgtcgttaaacggcgcaggaagtcatcgt 120
Query: 2404 ccaaggatcaacagtgaatattttagtcatttttaaatagacttgaacctttgaacatta 2463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaaggatcaacagtgaatattttagtcatttttaaatagacttgaacctttgaacatta 180
Query: 2464 ctaacatgaaacaatactgtcaagtctgcaaaaatcgactaaacttggatgtgatgtgta 2523
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 ctatcatgaaacaatactgtcaagtctgc-aaaatcgactaaacttggatgtgatgtgta 239
Query: 2524 agaacacttgcgtgtgactgaatttattaataacttctgtagtaagtaattgtagcataa 2583
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 240 agaacacttgcgtgtgactgaatttattaataacttctgtagtaagtaacagtagcataa 299
Query: 2584 gaaattacttttcatgagtttttaaagcagagaatgtttactttatatgtggtatctgta 2643
||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||
Sbjct: 300 gaaattactttacatgaggttttaaagcagagaatgtttactttatatat--tatctgta 357
Query: 2644 taaggtttatattaatttgattatttcttaggggatattcgatgagctccaaacgtagta 2703
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 358 taaggtttgtattaatttgattatttcttaggggatatttgatgagctccaaacgtagta 417
Query: 2704 ctagttagtgtagtttactataattatagtcttactaagaatagtttgtgtaacttagga 2763
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 418 ctagttagtttagtttactataattatagtcatactaagaatagtttgtgtaacttagga 477
Query: 2764 gaaattaagatataattttgtaacactatatacatttaatgttcttagactataagtata 2823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gaaattaagatataattttgtaacactatatacatttaatgttcttagactataagtata 537
Query: 2824 tattagattacttaaaatttataatatgatacttaag 2860
|||||||||||||||||||||||||||||||||||||
Sbjct: 538 tattagattacttaaaatttataatatgatacttaag 574
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 266,182
Number of extensions: 5101
Number of successful extensions: 5101
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5099
Number of HSP's successfully gapped: 4
Length of query: 2860
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2843
Effective length of database: 8,119,229
Effective search space: 23082968047
Effective search space used: 23082968047
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)