BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12871 (UTR included)
(2104 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B2D09 1102 0.0
>BF01053B2D09
Length = 724
Score = 1102 bits (556), Expect = 0.0
Identities = 605/619 (97%), Gaps = 3/619 (0%)
Strand = Plus / Minus
Query: 1486 gtgaagacttagctatacaagctcttgaagaagtgaatggtaccataatgggtggtcagc 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gtgaagacttagctatacaagctcttgaagaagtgaatggtaccataatgggtggtcagc 665
Query: 1546 ctataatagctcaattcggcagaaacagtaacaggatagaaattgaagagaatagataaa 1605
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 664 ctataatagctcaattcggcagaaacagtaacaggatagaaattgaagaaaatagataaa 605
Query: 1606 tcacactaattaaatcaatatcagtgtactcttaagtatcatattataaattttaagtaa 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tcacactaattaaatcaatatcagtgtactcttaagtatcatattataaattttaagtaa 545
Query: 1666 tctaatatatacttatagtctaagaacattaaatgtatatagtgttacaaaattatatct 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tctaatatatacttatagtctaagaacattaaatgtatatagtgttacaaaattatatct 485
Query: 1726 taatttctcctaagttacacaaactattcttagtaagactataattatagtaaactacac 1785
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 484 taatttctcctaagttacacaaactattcttagtatgactataattatagtaaactaaac 425
Query: 1786 taactagtactacgtttggagctcatcgaatatcccctaagaaataatcaaattaatata 1845
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 424 taactagtactacgtttggagctcatcaaatatcccctaagaaataatcaaattaataca 365
Query: 1846 aaccttatacagataccacatataaagtaaacattctctgctttaaaaactcatgaaaag 1905
||||||||||||||| | ||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 364 aaccttatacagata--atatataaagtaaacattctctgctttaaaacctcatgtaaag 307
Query: 1906 taatttcttatgctacaattacttactacagaagttattaataaattcagtcacacgcaa 1965
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 taatttcttatgctactgttacttactacagaagttattaataaattcagtcacacgcaa 247
Query: 1966 gtgttcttacacatcacatccaagtttagtcgatttttgcagacttgacagtattgtttc 2025
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 246 gtgttcttacacatcacatccaagtttagtcga-ttttgcagacttgacagtattgtttc 188
Query: 2026 atgttagtaatgttcaaaggttcaagtctatttaaaaatgactaaaatattcactgttga 2085
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 atgatagtaatgttcaaaggttcaagtctatttaaaaatgactaaaatattcactgttga 128
Query: 2086 tccttggacgatgacttcc 2104
|||||||||||||||||||
Sbjct: 127 tccttggacgatgacttcc 109
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 255,484
Number of extensions: 4779
Number of successful extensions: 4779
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4777
Number of HSP's successfully gapped: 1
Length of query: 2104
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2087
Effective length of database: 8,119,229
Effective search space: 16944830923
Effective search space used: 16944830923
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)