BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN12879 (UTR included)
         (3187 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01020A2D11                                                          167   1e-40
BF14_2054_C1                                                          163   2e-39

>BF01020A2D11
          Length = 647

 Score =   bits (84), Expect = 1e-40
 Identities = 84/84 (100%)
 Strand = Plus / Minus

                                                                        
Query: 3104 taatacctagagtttattatataaaatactacaaaactccaactaaaactaaccttacgc 3163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623  taatacctagagtttattatataaaatactacaaaactccaactaaaactaaccttacgc 564

                                    
Query: 3164 taagttcagtcgacgcgcgaagtt 3187
            ||||||||||||||||||||||||
Sbjct: 563  taagttcagtcgacgcgcgaagtt 540


>BF14_2054_C1
          Length = 592

 Score =   bits (82), Expect = 2e-39
 Identities = 82/82 (100%)
 Strand = Plus / Minus

                                                                        
Query: 3106 atacctagagtttattatataaaatactacaaaactccaactaaaactaaccttacgcta 3165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565  atacctagagtttattatataaaatactacaaaactccaactaaaactaaccttacgcta 506

                                  
Query: 3166 agttcagtcgacgcgcgaagtt 3187
            ||||||||||||||||||||||
Sbjct: 505  agttcagtcgacgcgcgaagtt 484


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 410,043
Number of extensions: 9285
Number of successful extensions: 9285
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9285
Number of HSP's successfully gapped: 2
Length of query: 3187
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3169
Effective length of database: 8,109,745
Effective search space: 25699781905
Effective search space used: 25699781905
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)