BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12897 (UTR included)
(3667 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B2B02 1126 0.0
>BF01030B2B02
Length = 765
Score = 1126 bits (568), Expect = 0.0
Identities = 582/588 (98%)
Strand = Plus / Plus
Query: 462 ggtatatcgacgttgtctggatgcggttcaccggagaacatggagcgcctcccggagctg 521
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 178 ggtatatcgacgttgtctggatgcggttcaccggagaatatggagcgcctcccggagctg 237
Query: 522 cccgcggctgaggagcgtcgcttgcggcgcgcggcccacgtgctgcaacaacgactcatc 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 cccgcggctgaggagcgtcgcttgcggcgcgcggcccacgtgctgcaacaacgactcatc 297
Query: 582 ctgcgacagtggctggccacgcacaaactacaacacgcttatcccaaactgctgagcttg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ctgcgacagtggctggccacgcacaaactacaacacgcttatcccaaactgctgagcttg 357
Query: 642 gacgtgtcgtcgctggaggacgtgtactgggtggaggactccgccgcgaggcacgtcatc 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gacgtgtcgtcgctggaggacgtgtactgggtggaggactccgccgcgaggcacgtcatc 417
Query: 702 gagcccaaggacttcagcgtgtggtccaccgcgaggcagagcctccctaccggcaaggaa 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gagcccaaggacttcagcgtgtggtccaccgcgaggcagagcctccctaccggcaaggaa 477
Query: 762 gccctgcagtcgctcaagtcggacctgtggagcgccgttgtcaagagtagcaagcatcag 821
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 478 gccctgcagtcgctcaagtcggacctgtggagcgccgtggtcaagagtagcaagcatcag 537
Query: 822 gacgcctggacatggggtggtatgctggtggtgtccatctcggtatgtgggctggtgacc 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gacgcctggacatggggtggtatgctggtggtgtccatctcggtatgtgggctggtgacc 597
Query: 882 ctggcagctatgactcagccgtccctggctcccgaagccaagcactcactgctgcagtac 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ctggcagctatgactcagccgtccctggctcccgaagccaagcactcactgctgcagtac 657
Query: 942 gtcaccgggaagtaccttcacccgcccagctgcaaggtggagtggggctgggaggagcca 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 658 gtcaccgggaagtaccttcacccgcccagctgcaaggtggagtggggctgggannngcca 717
Query: 1002 caggctgtaggcgagacgatgtgcttcactgtgcactgttaccaacga 1049
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 718 caggctgtaggcganacgatgtgcttcactgtgcactgttaccaacga 765
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,626
Number of extensions: 4051
Number of successful extensions: 4051
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4051
Number of HSP's successfully gapped: 1
Length of query: 3667
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3649
Effective length of database: 8,109,745
Effective search space: 29592459505
Effective search space used: 29592459505
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)