BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12899 (UTR included)
(3073 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3292_C1 2559 0.0
BF01048B1C03 1007 0.0
>BF14_3292_C1
Length = 1322
Score = 2559 bits (1291), Expect = 0.0
Identities = 1313/1321 (99%)
Strand = Plus / Plus
Query: 1223 gcgcgaggacatctccgtggtgttcttccaaaaggagggcgacaacgtggtttgggagga 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcgcgaggacatctccgtggtgttcttccaaaaggagggcgacaacgtggtttgggagga 61
Query: 1283 aagcgcgcacatcgtgctcgtccacaggcagtacgccatcgctttccacacgccgcccta 1342
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 62 aagcgcgcacatcgtgctcgtccacaggcagtacgcaatcgctttccacacgccgcccta 121
Query: 1343 cagagaccaggcggagacaggacacgtgcaggtgtatctccagctgaagcggatctcgga 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cagagaccaggcggagacaggacacgtgcaggtgtatctccagctgaagcggatctcgga 181
Query: 1403 caacgcccgcagcaacgccgtgccgttcgagtacatcccggaataccaaggtaccgttcg 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caacgcccgcagcaacgccgtgccgttcgagtacatcccggaataccaaggtaccgttcg 241
Query: 1463 taagcctgtccccgacctcagcgtcttctctcttctcctctcccctgacggcaacaacaa 1522
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taagcccgtccccgacctcagcgtcttctctcttctcctctcccctgacggcaacaacaa 301
Query: 1523 cgacagcaacataaccgaggaagcgctccctgacaaaagtgacggggcgccggtcgccgc 1582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgacagcaacataaccgaggaagcgctccctgacaaaagtgacggggcgccggtcgccgc 361
Query: 1583 cgagctggtgacctccacgagcgacctcgataccgccatggacaccaccatggacgtgga 1642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cgagctggtgacctccacgagcgacctcgataccgccatggacaccaccatggacgtgga 421
Query: 1643 ctctaacgagaagagtctggacgacctcctggagcaggtcgccgagctcgacgagatata 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctctaacgagaagagtctggacgacctcctggagcaggtcgccgagctcgacgagatata 481
Query: 1703 ctgcgagaacaggacgaggctagaggtcggcccgcgggaccacgacaccgaccccgagga 1762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctgcgagaacaggacgaggctagaggtcggcccgcgggaccacgacaccgaccccgagga 541
Query: 1763 gtttgacgacgcgggcacctacaccagtctgcagctcgccttcaagaaccccgtcaccat 1822
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtttgacgacgcaggcacctacaccagtctgcagctcgccttcaagaaccccgtcaccat 601
Query: 1823 agcggagcccgagaactacgaggacgtgcagccgcccgcgcacacctaccgcggacccat 1882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agcggagcccgagaactacgaggacgtgcagccgcccgcgcacacctaccgcggacccat 661
Query: 1883 catcgagttcacgccgctcaaacccgaggcggaggaggcgccgccgctacctcccaagcg 1942
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 662 catcgagttcacgccgctcaagcccgaggcggaggaggcgccgccgctacctcccaagcg 721
Query: 1943 agtccggaagaccagcgagtccttcaagaccagtcagacctccgtagacggcatcctcaa 2002
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 722 agtccggaagaccagcgagtccttcaagaccagtcagacctcagtagacggaatcctcaa 781
Query: 2003 gccgggccgccgtctaccgctcactcgcaaccccgaggcggcgagtgtgaacggagccga 2062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gccgggccgccgtctaccgctcactcgcaaccccgaggcggcgagtgtgaacggagccga 841
Query: 2063 gctgacgacggcgcgcagcgaacccgccctgccgcccgcgcccaagaaacgttcgttctt 2122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gctgacgacggcgcgcagcgaacccgccctgccgcccgcgcccaagaaacgttcgttctt 901
Query: 2123 ctcgagactgttccggaggagggacaagtcgcccgcgcccagcgtcaagtccgagggcaa 2182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ctcgagactgttccggaggagggacaagtcgcccgcgcccagcgtcaagtccgagggcaa 961
Query: 2183 gcgcgagccgcgtggcgccaggccggtggggcgctccgtgagcagcgtgtcggggctgcg 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 gcgcgagccgcgtggcgccaggccggtggggcgctccgtgagcagcgtgtcggggctgcg 1021
Query: 2243 gccggccaagttcaagtcgtccgcctcgctgaaggacaacgcatccttggcgtgcgcgga 2302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gccggccaagttcaagtcgtccgcctcgctgaaggacaacgcatccttggcgtgcgcgga 1081
Query: 2303 cagcgtcacgcgcatctctctccacgaggatgagccgtcgcgagcgcccagcctggcggc 2362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 cagcgtcacgcgcatctctctccacgaggatgagccgtcgcgagcgcccagcctggcggc 1141
Query: 2363 cggcctgccgcccgacgggaccatcctggtggcggagagcgtgctggcgctggacgcgga 2422
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1142 cggcctgccgcccgacgggaccatcctggtggcggnnagcgtgctggcgctggacgcgga 1201
Query: 2423 ctccttccggcgcctgcgggacgacctggagctgacggaggccgagcactacgcgctgta 2482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 ctccttccggcgcctgcgggacgacctggagctgacggaggccgagcactacgcgctgta 1261
Query: 2483 catggccgtggcgccccacgccaccgcctccgagttcgacgacaccagctgctactactc 2542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 catggccgtggcgccccacgccaccgcctccgagttcgacgacaccagctgctactactc 1321
Query: 2543 g 2543
|
Sbjct: 1322 g 1322
>BF01048B1C03
Length = 767
Score = 1007 bits (508), Expect = 0.0
Identities = 511/512 (99%)
Strand = Plus / Plus
Query: 5 gacggcccgcttcggaatacatagacgttaacgtcgttcgtcgttattttcgcaaaagtt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacggcccgcttcggaacacatagacgttaacgtcgttcgtcgttattttcgcaaaagtt 60
Query: 65 tacaacttctgacgatctttgggagttggaaaaactatttgtgttaaccgttacgacacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacaacttctgacgatctttgggagttggaaaaactatttgtgttaaccgttacgacacc 120
Query: 125 gccgttatcagtcgtaaaaagtctagcccttcacgacagtgtaataataacaaagtagcg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccgttatcagtcgtaaaaagtctagcccttcacgacagtgtaataataacaaagtagcg 180
Query: 185 ttttgatataaccagtttcttaattcttggaaccgtcacccgtgcatgctgtgttcgaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttgatataaccagtttcttaattcttggaaccgtcacccgtgcatgctgtgttcgaca 240
Query: 245 cgagaccttgataactagttccttggacgagcgaagagacagttattattggattatgcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgagaccttgataactagttccttggacgagcgaagagacagttattattggattatgcc 300
Query: 305 caaggaggtacgtctttagtttacgttgcgaatcagaggtgcgtgtttccttcagttata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaggaggtacgtctttagtttacgttgcgaatcagaggtgcgtgtttccttcagttata 360
Query: 365 tcgaatcagtgtggttgagtgcgaatttcgattacaggatttaattttccatacggtgtt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgaatcagtgtggttgagtgcgaatttcgattacaggatttaattttccatacggtgtt 420
Query: 425 ataatgtttatataaatgtgcgcgagccaaagaccgctgtgaggtgtccgccgacgatag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ataatgtttatataaatgtgcgcgagccaaagaccgctgtgaggtgtccgccgacgatag 480
Query: 485 tcgtcaaaatcgtgcgatggacaacggcggag 516
||||||||||||||||||||||||||||||||
Sbjct: 481 tcgtcaaaatcgtgcgatggacaacggcggag 512
Score = 367 bits (185), Expect = e-101
Identities = 188/189 (99%)
Strand = Plus / Plus
Query: 517 ttgaggcgatcacgaaggcggacccgctgttcgggccgggagtagaggcaatgccgcgac 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttgaggcgatcacgaaggcggacccgctgttcgggccgggagtagaggcaatgccgcgac 638
Query: 577 ctctgacctcccacccggggcagacctacgtccgcatagtggagcaacccgccgggaagg 636
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ctctgacctcccatccggggcagacctacgtccgcatagtggagcaacccgccgggaagg 698
Query: 637 cgctcaggttccggtacgagtgtgagggtcggtcggcgggctccatccccggggtgaaca 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 cgctcaggttccggtacgagtgtgagggtcggtcggcgggctccatccccggggtgaaca 758
Query: 697 gcaccctcg 705
|||||||||
Sbjct: 759 gcaccctcg 767
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 248,311
Number of extensions: 4851
Number of successful extensions: 4851
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4849
Number of HSP's successfully gapped: 3
Length of query: 3073
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3055
Effective length of database: 8,109,745
Effective search space: 24775270975
Effective search space used: 24775270975
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)