BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12912 (UTR included)
(5092 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B1A07 1269 0.0
>BF01062B1A07
Length = 707
Score = 1269 bits (640), Expect = 0.0
Identities = 658/663 (99%), Gaps = 1/663 (0%)
Strand = Plus / Minus
Query: 3997 gcagagatgagagcgccaaactgcgggatcacatatgtaagaacatggcgccgcttatac 4056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gcagagatgagagcgccaaactgcgggatcacatatgtaagaacatggcgccgcttatac 648
Query: 4057 aggcacgtatgagtagaataccaactacgccgggctctgattggagagatttgccaaata 4116
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 647 aggcacgtatgagtagaataccaactacgccgggcnctgattggagagatttgccaaata 588
Query: 4117 tatccgttgcactatctgatggtaccaaatgcaaggtgttgcaatatcgttacgacgaca 4176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tatccgttgcactatctgatggtaccaaatgcaaggtgttgcaatatcgttacgacgaca 528
Query: 4177 tcaaaaacggtcgttccaccagcggtgcactccgcggagtctgcgcctgttccgccggtg 4236
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 527 tcaaaaacggtcgttccaccagcggtgcactccgcggagtttgcgcctgttccgccggtg 468
Query: 4237 gagtgtgttccgtagccgacaagcaagaaaacacgctcataccgtggtgtctaccgcata 4296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gagtgtgttccgtagccgacaagcaagaaaacacgctcataccgtggtgtctaccgcata 408
Query: 4297 cagccaacagacataacaattgggccggactctatgggcgtatatcctgggacggctact 4356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cagccaacagacataacaattgggccggactctatgggcgtatatcctgggacggctact 348
Query: 4357 tcagtacaactgtgacggaccccgagccgatgggcaagcaaggccgcgtgctccaccccg 4416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tcagtacaactgtgacggaccccgagccgatgggcaagcaaggccgcgtgctccaccccg 288
Query: 4417 agcaaaaccgcgtcgtttctgttcgcgagtgcgctcgctcgcagggattccccgacactt 4476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 agcaaaaccgcgtcgtttctgttcgcgagtgcgctcgctcgcagggattccccgacactt 228
Query: 4477 acctattcgccggctccatacaggacaaacatcgacaggttggcaacgcggtgccgccac 4536
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 acttattcgccggctccatacaggacaaacatcgacaggttggcaacgcggtgccgccac 168
Query: 4537 ctttaggagcggctttgggcagagaaatcaagaaagcgttgagtgccttatcttgaaact 4596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ctttaggagcggctttgggcagagaaatcaagaaagcgttgagtgccttatcttgaaact 108
Query: 4597 tgtgatatgtacaa-aaaatattgtgttcaaaatcatgtctattatattttgacatttct 4655
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 107 tgtgatatgtacaaaaaaatattgtgttcagaatcatgtctattatattttgacatttct 48
Query: 4656 aaa 4658
|||
Sbjct: 47 aaa 45
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 545,880
Number of extensions: 9927
Number of successful extensions: 9927
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9926
Number of HSP's successfully gapped: 1
Length of query: 5092
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5074
Effective length of database: 8,109,745
Effective search space: 41148846130
Effective search space used: 41148846130
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)