BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12929 (UTR included)
(2398 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 174 4e-43
BF14_729_C1 84 1e-15
>BF14_729_C3
Length = 2041
Score = 174 bits (88), Expect = 4e-43
Identities = 235/284 (82%)
Strand = Plus / Minus
Query: 245 ttgtactgatactcctctttgtcagtcgaatgtatgacaagccacagtcacaaacaagtt 304
|||||| ||| |||||||| ||| ||| |||||||||||||||||||||||| | ||||
Sbjct: 1203 ttgtaccgatgctcctcttcgtctgtccaatgtatgacaagccacagtcacagtcgagtt 1144
Query: 305 ggtacacaaccgctcgttgtaaagaaatggtattcttaataggtctcaagaattggctaa 364
||| ||| ||||| ||||||||| |||| || | || || ||||||||||||||||| |
Sbjct: 1143 tgtatacacccgcttgttgtaaaggaatgttacttttgattggtctcaagaattggctca 1084
Query: 365 atttcatgtgtagtttgtgtatagccttgatataaagctccttcaagatgtttcctattc 424
|||| | ||| |||||| |||| || || ||| || |||||||||||| |||||||
Sbjct: 1083 ctttcttatgtggtttgtaaatagttttaatggaaaccttcttcaagatgttgcctattc 1024
Query: 425 agtcagtaattcccttcagatatgataatatcgctggttatcgctcaattgtcggtggct 484
|||||||| |||||||| ||||| || |||||| |||| ||| |||| ||| |||||||
Sbjct: 1023 tgtcagtaactcccttcacatatggtagtatcgcaggttgtcgttcaactgtgggtggct 964
Query: 485 tcaagtgtttcttgcaatgctagcgaggcacggacaagttgttg 528
||| ||| ||||||| ||||| ||||||||||| || |||||||
Sbjct: 963 tcaggtggttcttgcgatgctggcgaggcacgggcaggttgttg 920
>BF14_729_C1
Length = 981
Score = 83.8 bits (42), Expect = 1e-15
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 338 tcttaataggtctcaagaattggctaaatttcatgtgtagtttgtgtatagccttgatat 397
|||| |||||||||||||||||||| | |||| | ||| ||||||| |||| ||||||
Sbjct: 41 tcttgataggtctcaagaattggctcactttcttatgtggtttgtgaatagtcttgatgg 100
Query: 398 aaagctccttcaagatgtttcctattcagtcagtaattccct 439
|||||| |||||| ||||| ||||||| |||||||| |||||
Sbjct: 101 aaagcttcttcaaaatgttgcctattctgtcagtaactccct 142
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 277,514
Number of extensions: 5523
Number of successful extensions: 5523
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5522
Number of HSP's successfully gapped: 2
Length of query: 2398
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2381
Effective length of database: 8,119,229
Effective search space: 19331884249
Effective search space used: 19331884249
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)