BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12935 (UTR included)
(1807 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A1G10 1356 0.0
>BF01022A1G10
Length = 704
Score = 1356 bits (684), Expect = 0.0
Identities = 699/704 (99%)
Strand = Plus / Plus
Query: 246 cagtgtgatactaaattgttattaaaaaatcgcgaaagtattataaagataatttcctgg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtgtgatactaaattgttattaaaaaatcgcgaaagtattataaagataatttcctgg 60
Query: 306 aaaacaatttcttttgtcagggaaagtgagagttgtaggtgaaattgtatatttaaatta 365
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 aaaacaatttcttttgtcagggaaagtgagagttgtaggtgaaattgtataattaaatta 120
Query: 366 ataagaaagtcgctggtatttataattaacattaaattattaatttgttagtccaaaatg 425
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 ataagaaagtcgctggtatttataataaacattaaattattaatttgttagtccaaaatg 180
Query: 426 aaatattgcttggcattattgttcttattaaaaaatatacttgctgatccaacgcctata 485
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 181 aaatattgcttggcattattgttcttattaaaaaatattcttgctgatccaacgcctata 240
Query: 486 gtattatggcacggaatgggagacacctgttgtatgtcatttagccttggtggatttaaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtattatggcacggaatgggagacacctgttgtatgtcatttagccttggtggatttaaa 300
Query: 546 actttcctagaaggtcagataccaggagtttatgtgttgtctttaaggattggtaattct 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actttcctagaaggtcagataccaggagtttatgtgttgtctttaaggattggtaattct 360
Query: 606 actattgaagactatgaaaatggatacttcatgaacccaaacaaacaagttgagtttgta 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actattgaagactatgaaaatggatacttcatgaacccaaacaaacaagttgagtttgta 420
Query: 666 tgtgacaaactctcaaaggatccaaagctacaaaatggtttcaatgctataggattctca 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtgacaaactctcaaaggatccaaagctacaaaatggtttcaatgctataggattctca 480
Query: 726 caaggaagtcaatttttaagagctgttgtccagagatgtggacataatcttgcccctata 785
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 481 caaggaagtcaatttttaagagctgttgtacagagatgtggacataatcttgcccctata 540
Query: 786 aagaacctgataactttgggcggacaacaccaaggtgtttacggaatacctcattgtttt 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagaacctgataactttgggcggacaacaccaaggtgtttacggaatacctcattgtttt 600
Query: 846 gcattacatcacgaaacctgtgattatatccgaaaacttcttaactttgccgcatattat 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcattacatcacgaaacctgtgattatatccgaaaacttcttaactttgccgcatattat 660
Query: 906 agttgggtccaaaaatctctcgtccaagctacatactggcacga 949
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 661 agttgggtccaaaaatctctcgtgcaagctacatactggcacga 704
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 245,869
Number of extensions: 5200
Number of successful extensions: 5200
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5198
Number of HSP's successfully gapped: 1
Length of query: 1807
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1790
Effective length of database: 8,119,229
Effective search space: 14533419910
Effective search space used: 14533419910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)