BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12956 (UTR included)
(6369 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B2F08 1431 0.0
>BF01055B2F08
Length = 738
Score = 1431 bits (722), Expect = 0.0
Identities = 734/738 (99%)
Strand = Plus / Plus
Query: 5005 ctaatgacttgacggacatgatacaggtgatatgtatgtccacgtaccgcccggtcgtgc 5064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaatgacttgacggacatgatacaggtgatatgtatgtccacgtaccgcccggtcgtgc 60
Query: 5065 acatgctacggagagtgtgcgttcaaatcgcagacctggctccgaacacggcggccacag 5124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 acatgctacggagagtgtgcgttcaaatcgccgacctggctccgaacacggcggccacag 120
Query: 5125 tggctcgggcggctgttggtgctgtcatgagagaaatgaaagaagaagacccgcccaccg 5184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggctcgggcggctgttggggctgtcatgagagaaatgaaagaagaagacccgcccaccg 180
Query: 5185 ccagcctcgccagagtcttaggattcttggcatgtctcgtgtcacacgcgccagtcaagt 5244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccagcctcgccagagtcttgggattcttggcatgtctcgtgtcacacgcgccagtcaagt 240
Query: 5245 gtgccgtgttgcacgctatgagcgccggaggtcccaaagctagcgaagtacaaacggcgc 5304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgccgtgttgcacgctatgagcgccggaggtcccaaagctagcgaagtacaaacggcgc 300
Query: 5305 tttgtaatgttttcaacttgtcaaactcgtcgaacgaacacgccgcggcccaagagtatg 5364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttgtaatgttttcaacttgtcaaactcgtcgaacgaacacgccgcggcccaagagtatg 360
Query: 5365 ctgctcatgtgttagcggcgttctgtgacattgaaataactttaactcctctcacagcta 5424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgctcatgtgttagcggcgttctgtgacattgaaataactttaactcctctcacagcta 420
Query: 5425 acatcgatagcgttctcgccaattcattacccactaaagacgctcttacggcgtttttag 5484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acatcgatagcgttctcgccaattcattacccactaaagacgctcttacggcgtttttag 480
Query: 5485 acgcaacggcaaattgtctagaatctacgacgaaaacctgttcagtggcctcgtcggtat 5544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgcaacggcaaattgtctagaatctacgacgaaaacctgttcagtggcctcgtcggtat 540
Query: 5545 tacgcgcctactacgtcttaacggatcacgaatacgggttcctgcaatttagaaaattcg 5604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tacgcgcctactacgtcttaacggatcacgaatacgggttcctgcaatttagaaaattcg 600
Query: 5605 tgacaaagagaacggaagccctcggtaaatattttaagtggacgacggagagcgcgggag 5664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgacaaagagaacggaagccctcggtaaatattttaagtggacgacggagagcgcgggag 660
Query: 5665 aagacaggacggactgcctgaacctgttcctcgacttaataaagatactgagagttgaac 5724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagacaggacggactgcctgaacctgttcctcgacttaataaagatactgagagttgaac 720
Query: 5725 acggcgagggcccgggcg 5742
|||||||||| |||||||
Sbjct: 721 acggcgaggggccgggcg 738
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 66,993
Number of extensions: 7090
Number of successful extensions: 7090
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7090
Number of HSP's successfully gapped: 1
Length of query: 6369
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6351
Effective length of database: 8,109,745
Effective search space: 51504990495
Effective search space used: 51504990495
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)