BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12959 (UTR included)
(14,077 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2000_C1 1604 0.0
>BF14_2000_C1
Length = 917
Score = 1604 bits (809), Expect = 0.0
Identities = 841/851 (98%), Gaps = 3/851 (0%)
Strand = Plus / Plus
Query: 13230 gtttcgttccgcgccggctccaacgtagagttcggcggagtgggcacgccggtgacgccg 13289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtttcgttccgcgccggctccaacgtagagttcggcggagtgggcacgccggtgacgccg 61
Query: 13290 ggtggagccggcggagacgcctacgctctggacgagcccgcgcgcaaaggaagagacttc 13349
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 62 ggtggagccggcggagacgcctacgctctggacgagcccgcgcgcaagggaagagacttc 121
Query: 13350 agcaaccccatgtacgaggccgtcacccgggctgcagcggctggcgagcccgaaccaccg 13409
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 122 agcaaccccatgtacgaggccgtcacccgggccgcggcggctggcgagcccgaaccaccg 181
Query: 13410 ttacccgggatctacgaagttccggaagaaataaaagacaaagtagtgtcggcggtgatc 13469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttacccgggatctacgaagttccggaagaaataaaagacaaagtagtgtcggcggtgatc 241
Query: 13470 tccccgtcgtccaccgagacccgcggtacccggcgcccccgggccctggacccggccgcg 13529
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 242 tccccgtcgtccaccgagacccgcggcacccggcgcccccgggccctggacccggccgcg 301
Query: 13530 gacaccggccacgacaccgcgcagctcgtgagggaggaccgccactgagcgctgccgccc 13589
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 302 gacaccggccacgacaccgcgcagctcgtgagggaggaccgccactgagcactgccgccc 361
Query: 13590 tcgcgtcttccatccgcccctcttcgtattcgacagttaactgttgtctctttttttctc 13649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcgcgtcttccatccgcccctcttcgtattcgacagttaactgttgtctctttttttctc 421
Query: 13650 aaactctttaatatattggcggtagaagggttctctatgtcaatgtgccagagaggggat 13709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaactctttaatatattggcggtagaagggttctctatgtcaatgtgccagagaggggat 481
Query: 13710 cttcactaattcgtgaactgtgaactattttcatgtgtactttttgttatagtaggaata 13769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cttcactaattcgtgaactgtgaactattttcatgtgtactttttgttatagtaggaata 541
Query: 13770 ttttccttgttatatttgcttgtcctcgttgtgacgcgtcttactttcctcctctctccg 13829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttttccttgttatatttgcttgtcctcgttgtgacgcgtcttactttcctcctctctccg 601
Query: 13830 tgtgtcgtcctctcccgtccacgtctcgttccgtgagccctaccgtgccgctcgccggtg 13889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgtgtcgtcctctcccgtccacgtctcgttccgtgagccctaccgtgccgctcgccggtg 661
Query: 13890 gcggtg---ggtgacctgcctgtgtcacgtcatatttcccgcgtgtattttctataccta 13946
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gcggtgggcggtgacccgcctgtgtcacgtcatatttcccgcgtgtattttctataccta 721
Query: 13947 tgttatttgttatatattctatgcagcgcacctctcccgcgcgctccgctggcagtgacg 14006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgttatttgttatatattctatgcagcgcacctctcccgcgcgctccgctggcagtgacg 781
Query: 14007 actccccggccgtacttaagcgtcagtatctattgtttcgttattttctggaaaccgaaa 14066
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 782 actccccggccgtacttaagagtcagtatctattgtttcgttattttctggaaaccgaaa 841
Query: 14067 tcatatcatcg 14077
|||||||||||
Sbjct: 842 tcatatcatcg 852
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 151,828
Number of extensions: 16469
Number of successful extensions: 16469
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 16468
Number of HSP's successfully gapped: 1
Length of query: 14077
Length of database: 8,280,457
Length adjustment: 19
Effective length of query: 14058
Effective length of database: 8,100,261
Effective search space: 113873469138
Effective search space used: 113873469138
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 36 (71.9 bits)