BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12963 (UTR included)
(3034 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_945_C1 1697 0.0
BF01045A1E03 1124 0.0
>BF14_945_C1
Length = 1470
Score = 1697 bits (856), Expect = 0.0
Identities = 887/896 (98%), Gaps = 1/896 (0%)
Strand = Plus / Plus
Query: 2140 aagatacgatcaacaccactgtggacacaactaagaaagctgctgaagaggctaaggaga 2199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aagatacgatcaacaccactgtggacacaactaagaaagctgctgaagaggctaaggaga 585
Query: 2200 aggctagacttgccgccgaagcagcgaaagaagaagctaagagagcagccaatgctgcta 2259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aggctagacttgccgccgaagcagcgaaagaagaagctaagagagcagccaatgctgcta 645
Query: 2260 tcgaagaatcgaagaaggcagcggagaaagcggcagcggacgcgtccaatgctgtgaaca 2319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tcgaagaatcgaagaaggcagcggagaaagcggcagcggacgcgtccaatgctgtgaaca 705
Query: 2320 gcacagttgacaatactctgaagcgtgtcgagaacgcagccgatcaaggtttgaagaacg 2379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gcacagttgacaatactctgaagcgtgtcgagaacgcagccgatcaaggtttgaagaacg 765
Query: 2380 ccagccaagtcgtagacgctaagatcaaggacgccgacaaatacttgaacgataaacgcg 2439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ccagccaagtcgtagacgctaagatcaaggacgccgacaaatacttgaacgataaacgcg 825
Query: 2440 aatcgctggtatcaaacttatctcatgctgcccacgatggggcagagggtgctgcgggcc 2499
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 826 aatcgctggtatcaaacctatctcatgctgcccacgacggggcagagggtgctgcgggcc 885
Query: 2500 ttctcagtaagggactggccgccttccccaagtaaatcatccaatccaccactgaccccg 2559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 ttctcagtaagggactggccgccttccccaagtaaatcatccaatccaccactgaccccg 945
Query: 2560 ctaccatcacctgggaaacttgataacatattgtatataatataaacatgataataaaat 2619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 ctaccatcacctgggaaacttgataacatattgtatataatataaacatgataataaaat 1005
Query: 2620 acaaatatattatatagtattttataatagatattaatcaaaataaatacaaattaccga 2679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 acaaatatattatatagtattttataatagatattaatcaaaataaatacaaattaccga 1065
Query: 2680 tttaaagtttcccaaccctatttgttgatattcaggagtgta-ttttatcgaatgctata 2738
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 1066 tttaaagtttcccaaccctatttgttgatattcagcggtgtatttttatcgaatgctata 1125
Query: 2739 aattgttttgttagattaaacattcactagcactttttattcgtcaaattatttaaaata 2798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 aattgttttgttagattaaacattcactagcactttttattcgtcaaattatttaaaata 1185
Query: 2799 cgtacgtatgaatattttatttttgattataattcatataacaacaattacaaaataatg 2858
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1186 cgtacgtatgaatattttgtttttgattataattcatataacaacaattacaaaacaatg 1245
Query: 2859 tcaaatctgacactcgtgtcaaatgtagtttcgtaatttgcgtcattattttctaagagc 2918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 tcaaatctgacactcgtgtcaaatgtagtttcgtaatttgcgtcattattttctaagagc 1305
Query: 2919 acttatacgttttaaaaatatatttaatttaagtcacaattttactgttcatttatattg 2978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 acttatacgttttaaaaatatatttaatttaagtcacaattttactgttcatttatattg 1365
Query: 2979 taaatagtgtaagttattatagatatatatagtttattttgcatttggtgtgcatt 3034
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1366 taaatagtgtaagttattatagatatatagattttattttgcatttggtgtgcatt 1421
Score = 959 bits (484), Expect = 0.0
Identities = 516/529 (97%), Gaps = 12/529 (2%)
Strand = Plus / Plus
Query: 319 ttcgaatatcgtcttttttagaacgtactgcagtgcgcttgaaggttgcggatattatta 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcgaatatcgtcttttttagaacgtactgcagtgcgcttgaaggttgcggatattatta 60
Query: 379 cggtgattcggtcatacgccgcactttgtaacagcgctaagttaaaattggattgtgtaa 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggtgattcggtcatacgccgcactttgtaacagcgctaagttaaaattggattgtgtaa 120
Query: 439 tttccattacagtgttttaaattattcccaaatttttgtgaattttattcatcgatttca 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttccattacagtgttttaaattattcccaaatttttgtgaattttattcatcgatttca 180
Query: 499 aaatgttcagtggaatcgcag------------gtgcgttccgaagcatcggtgaaaaga 546
||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 aaatgttcagtggaatcgcagacaagaatctcggtgcgttccgaagcatcggtgaaaaga 240
Query: 547 ctgcttcgcttttcgaaaaaaagaagaaagatgtggaacagatcgcccaagagaaggcag 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgcttcgcttttcgaaaaaaagaagaaagatgtggaacagatcgcccaagagaaggcag 300
Query: 607 cggaagcagctcacgtcgtagaagaacaggtgaagaagactggagaacttgtgagcggcg 666
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagaagcagctcacgtcgtagaagaacaggtgaagaagactggagaacttgtgagcggcg 360
Query: 667 cggagaaaaacgctgctgaagctgccgatactgctgcgaatgtgaggaattctgctatcg 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggagaaaaacgctgctgaagctgccgatactgctgcgaatgtgaggaattctgctatcg 420
Query: 727 acgctctcgataaggagttggggaaggtggcgctagctgctggcgaggcgaaggacgctg 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgctctcgataaggagttggggaaggtggcgctagctgctggcgaggcgaaggacgctg 480
Query: 787 ctagcaaggctgtagctgatggaaagaaggttgtcgacactaccaaaga 835
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctagcaaggctgtagctgatggaaagaaggttgtcgacactaccaaaga 529
>BF01045A1E03
Length = 763
Score = 1124 bits (567), Expect = 0.0
Identities = 579/583 (99%)
Strand = Plus / Plus
Query: 322 gaatatcgtcttttttagaacgtactgcagtgcgcttgaaggttgcggatattattacgg 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatatcgtcttttttagaacgtactgcagtgcgcttgaaggttgcggatattattacgg 60
Query: 382 tgattcggtcatacgccgcactttgtaacagcgctaagttaaaattggattgtgtaattt 441
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 tgattcggtcatacgccgcactttgtaacagcgctaagttaaaattgaattgtgtaattt 120
Query: 442 ccattacagtgttttaaattattcccaaatttttgtgaattttattcatcgatttcaaaa 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccattacagtgttttaaattattcccaaatttttgtgaattttattcatcgatttcaaaa 180
Query: 502 tgttcagtggaatcgcaggtgcgttccgaagcatcggtgaaaagactgcttcgcttttcg 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgttcagtggaatcgcaggtgcgttccgaagcatcggtgaaaagactgcttcgcttttcg 240
Query: 562 aaaaaaagaagaaagatgtggaacagatcgcccaagagaaggcagcggaagcagctcacg 621
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 241 aaaaaaagaagaaagatgtggaacagatcgcccaagagaaggcagcagaggcagctcacg 300
Query: 622 tcgtagaagaacaggtgaagaagactggagaacttgtgagcggcgcggagaaaaacgctg 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgtagaagaacaggtgaagaagactggagaacttgtgagcggcgcggagaaaaacgctg 360
Query: 682 ctgaagctgccgatactgctgcgaatgtgaggaattctgctatcgacgctctcgataagg 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgaagctgccgatactgctgcgaatgtgaggaattctgctatcgacgctctcgataagg 420
Query: 742 agttggggaaggtggcgctagctgctggcgaggcgaaggacgctgctagcaaggctgtag 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agttggggaaggtggcgctagctgctggcgaggcgaaggacgctgctagcaaggctgtag 480
Query: 802 ctgatggaaagaaggttgtcgacactaccaaagacactattgctacaactgttgatagca 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgatggaaagaaggttgtcgacactaccaaagacactattgctacaactgttgatagca 540
Query: 862 caaagaaagctgcggagtccgcgtaccacagcacaaaagatac 904
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 541 caaagaaagctgcggagtccgcgtacaacagcacaaaagatac 583
Score = 331 bits (167), Expect = 4e-90
Identities = 184/192 (95%)
Strand = Plus / Plus
Query: 2135 cacagaagatacgatcaacaccactgtggacacaactaagaaagctgctgaagaggctaa 2194
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cacaaaagatacgatcaacaccactgtggacacaactaagaaagctgctgaagaggctaa 631
Query: 2195 ggagaaggctagacttgccgccgaagcagcgaaagaagaagctaagagagcagccaatgc 2254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ggagaaggctagacttgccgccgaagcagcgaaagaagaagctaagagagcagccaatgc 691
Query: 2255 tgctatcgaagaatcgaagaaggcagcggagaaagcggcagcggacgcgtccaatgctgt 2314
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 692 tgctatcgaagaatcgaagnnnncagcggnnnaagcggcagcggacgcgtccaatgctgt 751
Query: 2315 gaacagcacagt 2326
||||||||||||
Sbjct: 752 gaacagcacagt 763
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 357,124
Number of extensions: 7465
Number of successful extensions: 7465
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7464
Number of HSP's successfully gapped: 5
Length of query: 3034
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3016
Effective length of database: 8,109,745
Effective search space: 24458990920
Effective search space used: 24458990920
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)