BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13007 (UTR included)
(2878 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C2 163 2e-39
BF01011A1H06 153 2e-36
BF01052B1F12 115 4e-25
BF01012A1B09 105 4e-22
BF01025A1D01 90 2e-17
BF01017A2H11 82 6e-15
BF01050A2E08 80 2e-14
BF01025B2E05 78 9e-14
BF01012A1E04 78 9e-14
BF14_729_C3 76 3e-13
BF01056A1B08 72 5e-12
BF01024A1H07 72 5e-12
BF01012B1C01 70 2e-11
BF01058B2C06 68 8e-11
>BF14_729_C2
Length = 1289
Score = 163 bits (82), Expect = 2e-39
Identities = 133/150 (88%)
Strand = Plus / Plus
Query: 2 ctcgtctgcctgtgatcacgactgctgaaaagtaaccgaaacgtcggcagtatgtagttt 61
|||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 529 ctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagttt 588
Query: 62 tttacaaaaataaagcactcatagtacatccgaaaaataatattttcatttaaatgaata 121
|| ||||||||||||||| | |||| ||||||| ||| || |||||||||||||| ||
Sbjct: 589 ttaacaaaaataaagcacgcgtagtttatccgaataattctagtttcatttaaatgatta 648
Query: 122 aaactcacgaaagtcttagatctgattaaa 151
||||| |||||||||||||||| ||||||
Sbjct: 649 aaactggcgaaagtcttagatctcattaaa 678
>BF01011A1H06
Length = 739
Score = 153 bits (77), Expect = 2e-36
Identities = 131/149 (87%)
Strand = Plus / Plus
Query: 2 ctcgtctgcctgtgatcacgactgctgaaaagtaaccgaaacgtcggcagtatgtagttt 61
|||||||||| ||||||||| | ||||||||||||||||||||||| |||||||||| |
Sbjct: 461 ctcgtctgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggagtatgtagtct 520
Query: 62 tttacaaaaataaagcactcatagtacatccgaaaaataatattttcatttaaatgaata 121
|||||||||||||| ||| | |||| |||||||||||| || ||||||||||||||||
Sbjct: 521 tttacaaaaataaatcacgcgtagtttatccgaaaaatactagattcatttaaatgaata 580
Query: 122 aaactcacgaaagtcttagatctgattaa 150
||| || ||||| |||||||||| |||||
Sbjct: 581 aaagtcgcgaaaatcttagatctcattaa 609
Score = 67.9 bits (34), Expect = 8e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 2789 taatgagatccaagattttcttgagttttattcatttaaatgaaactaatatttatagga 2848
|||||||||| ||||||||| || ||||||||||||||||||| ||| ||||| | |||
Sbjct: 608 taatgagatctaagattttcgcgacttttattcatttaaatgaatctagtatttttcgga 549
Query: 2849 tgaactaagcgtggtttgtttt 2870
| ||||| ||||| ||| ||||
Sbjct: 548 taaactacgcgtgatttatttt 527
>BF01052B1F12
Length = 785
Score = 115 bits (58), Expect = 4e-25
Identities = 122/142 (85%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 2 ctcgtctgcctgtgatcacgactgctgaaaagtaaccgaaacgtcggcagtatgtagttt 61
|||||||||| ||||||||| ||||||||||| |||| ||| |||| ||||||||| ||
Sbjct: 443 ctcgtctgcccgtgatcacggttgctgaaaagtcaccgtaacatcgggagtatgtagctt 384
Query: 62 t-ttacaaaaataaagcactcatagtacatccgaaaaataatattttcatttaaatgaat 120
||||||||||||| || | |||| |||||||||||| || ||||||||||||||||
Sbjct: 383 ccttacaaaaataaaagacgcgaagtatatccgaaaaatattagtttcatttaaatgaat 324
Query: 121 aaaactcacgaaagtcttagat 142
||||||| ||||| ||||||||
Sbjct: 323 aaaactcgcgaaattcttagat 302
>BF01012A1B09
Length = 841
Score = 105 bits (53), Expect = 4e-22
Identities = 113/132 (85%), Gaps = 2/132 (1%)
Strand = Plus / Minus
Query: 13 gtgatcacgactgctgaaaagtaaccgaaacgtcggcagtatgtagttttttacaaaaat 72
||||||||| |||||||||||||||||||||||||| | ||||||| ||||| || |||
Sbjct: 837 gtgatcacggctgctgaaaagtaaccgaaacgtcgggattatgtag--ttttaaaataat 780
Query: 73 aaagcactcatagtacatccgaaaaataatattttcatttaaatgaataaaactcacgaa 132
||| | | |||| |||||||| ||| || ||||||||||||||||||||||| |||
Sbjct: 779 aaaatccgcgtagtgtatccgaaatatattagtttcatttaaatgaataaaactcgcgac 720
Query: 133 agtcttagatct 144
||||||||||||
Sbjct: 719 agtcttagatct 708
>BF01025A1D01
Length = 764
Score = 89.7 bits (45), Expect = 2e-17
Identities = 102/119 (85%), Gaps = 4/119 (3%)
Strand = Plus / Minus
Query: 2 ctcgtctgcctgtgatcacgactgctgaaaagtaaccgaaacgtcggcagtatgtagttt 61
|||||||||| ||||||||| ||||||||||||||||||||||||| || |||| ||
Sbjct: 483 ctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagcctgta-att 425
Query: 62 tttacaaaaataaagcactcatagtacatccgaaaaataatattttcatttaaatgaat 120
|| |||||| |||||||| | ||| |||||||||||| || ||||||||||||||||
Sbjct: 424 ttaacaaaattaaagcacgc---gtatatccgaaaaatattagtttcatttaaatgaat 369
>BF01017A2H11
Length = 713
Score = 81.8 bits (41), Expect = 6e-15
Identities = 86/99 (86%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 2 ctcgtctgcctgtgatcacgactgctgaaaagtaaccgaaacgtcggcagtat-gtag-t 59
|||||||||| ||||||||| ||||||||||||||| ||||||||| ||||| || |
Sbjct: 34 ctcgtctgcccgtgatcacggttgctgaaaagtaaccaaaacgtcgggagtatnnnagtt 93
Query: 60 tttttacaaaaataaagcactcatagtacatccgaaaaa 98
|||||||||||||||||||| | |||| ||||||||||
Sbjct: 94 tttttacaaaaataaagcacgcgtagtttatccgaaaaa 132
>BF01050A2E08
Length = 813
Score = 79.8 bits (40), Expect = 2e-14
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 26 ctgaaaagtaaccgaaacgtcggcagtatgtagttttttacaaaaataaagcactcatag 85
||||||||||||||||||||||| |||||| |||||| ||||||||||| ||| |||
Sbjct: 143 ctgaaaagtaaccgaaacgtcgggagtatggagttttaaacaaaaataaatcacgtgtag 202
Query: 86 tacatccgaaaaataatattttcatttaaatgaataaaactcacgaaagtct 137
|| || || |||||| ||||| | |||||| ||||||||||| | |||||||
Sbjct: 203 tatatacggaaaatattatttccttttaaa-gaataaaactcgctaaagtct 253
>BF01025B2E05
Length = 759
Score = 77.8 bits (39), Expect = 9e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 89 atccgaaaa-ataatattttcatttaaatgaataaaactcacgaaagtcttagatctgat 147
||||||||| ||| || ||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 60 atccgaaaatatactagtttcatttaaatgaataaaactcgcgaaagtcttagatctcat 119
Query: 148 taa 150
|||
Sbjct: 120 taa 122
>BF01012A1E04
Length = 841
Score = 77.8 bits (39), Expect = 9e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 83 tagtacatccgaaaa-ataatattttcatttaaatgaataaaactcacgaaagtcttaga 141
||||| ||||||||| ||| || ||||||||||||||||||||||| |||||||||||||
Sbjct: 554 tagtatatccgaaaatatattagtttcatttaaatgaataaaactcgcgaaagtcttaga 613
Query: 142 tct 144
|||
Sbjct: 614 tct 616
>BF14_729_C3
Length = 2041
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 2 ctcgtctgcctgtgatcacgactgctgaaaagtaaccgaaacgtcggcagtatgtagttt 61
|||||||||| ||||||||| ||||| ||||||||||||||||||| | ||||||||||
Sbjct: 1589 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1648
Query: 62 tt 63
||
Sbjct: 1649 tt 1650
>BF01056A1B08
Length = 761
Score = 71.9 bits (36), Expect = 5e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 105 tttcatttaaatgaataaaactcacgaaagtcttagatct 144
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 138 tttcatttaaatgaataaaactcgcgaaagtcttagatct 99
Score = 67.9 bits (34), Expect = 8e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 2791 atgagatccaagattttcttgagttttattcatttaaatgaaactaatat 2840
|||||||| |||| |||| ||||||||||||||||||||||||||||||
Sbjct: 96 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatat 145
>BF01024A1H07
Length = 726
Score = 71.9 bits (36), Expect = 5e-12
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 2 ctcgtctgcctgtgatcacgactgctgaaaagtaaccgaaacgtcggcagtatgtagttt 61
|||||||||| ||||||||| ||||||||||||||||||||||| | | ||||||| ||
Sbjct: 648 ctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcngnattatgtagntt 707
Query: 62 t 62
|
Sbjct: 708 t 708
>BF01012B1C01
Length = 950
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 2 ctcgtctgcctgtgatcacgactgctgaaaagtaaccgaaacgtcggcagtatgtagtt 60
|||||||| | ||||||||| |||||| ||||||||||||||||||| ||| |||||||
Sbjct: 654 ctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgggagtgtgtagtt 712
>BF01058B2C06
Length = 772
Score = 67.9 bits (34), Expect = 8e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 2 ctcgtctgcctgtgatcacgactgctgaaaagtaaccgaaacgtcggcagtatgtagttt 61
|||||||| | ||||||||| |||| | ||||||||||||||||||| | ||||||||||
Sbjct: 481 ctcgtctggccgtgatcacggctgcagcaaagtaaccgaaacgtcgggaatatgtagttt 422
Query: 62 tttacaaaaataaagcac 79
| |||||||||||||
Sbjct: 421 taacaaaaaataaagcac 404
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 347,307
Number of extensions: 7979
Number of successful extensions: 7979
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 7973
Number of HSP's successfully gapped: 17
Length of query: 2878
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2861
Effective length of database: 8,119,229
Effective search space: 23229114169
Effective search space used: 23229114169
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)