BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13009 (UTR included)
(2779 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 103 1e-21
BF14_1695_C1 88 9e-17
BF01061B1E05 84 1e-15
BF01049B2H03 76 3e-13
BF01044B2E12 72 5e-12
>BF14_729_C3
Length = 2041
Score = 103 bits (52), Expect = 1e-21
Identities = 75/82 (91%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 33 tttaaataataaaatccgcgtagtaaatcggaata---ctagtttcatttaaatgaatat 89
||||||||||||||||||||||||| ||| ||||| |||| ||||||||||||||||
Sbjct: 1648 tttaaataataaaatccgcgtagtatatccgaataatactagcttcatttaaatgaatac 1707
Query: 90 tcgcgaaaatcttagatctcat 111
||||||||||||||||||||||
Sbjct: 1708 tcgcgaaaatcttagatctcat 1729
>BF14_1695_C1
Length = 1407
Score = 87.7 bits (44), Expect = 9e-17
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 66 tactagtttcatttaaatgaatattcgcgaaaatcttagatctcatta 113
||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1067 tactagtttcatttaaatgaatactcgcgaaaatcttagatctcatta 1020
>BF01061B1E05
Length = 745
Score = 83.8 bits (42), Expect = 1e-15
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 65 atactagtttcatttaaatgaatattcgcgaaaatcttagatctca 110
|||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 9 atactagtttcatttaaatgaatactcgcgaaaatcttagatctca 54
>BF01049B2H03
Length = 832
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 64 aatactagtttcatttaaatgaatattcgcgaaaatcttagatctcatta 113
|||| |||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 305 aatattagtttcatttaaatgaatactcgctaaaatcttagatctcatta 354
>BF01044B2E12
Length = 823
Score = 71.9 bits (36), Expect = 5e-12
Identities = 50/54 (92%), Gaps = 3/54 (5%)
Strand = Plus / Plus
Query: 34 ttaaataataaaatccgcgtagtaaatcgg---aatactagtttcatttaaatg 84
|||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 32 ttaaataataaaatccgcgtagtaaatccgaaaaatactagtttcatttaaatg 85
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 334,602
Number of extensions: 6798
Number of successful extensions: 6798
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 6796
Number of HSP's successfully gapped: 5
Length of query: 2779
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2762
Effective length of database: 8,119,229
Effective search space: 22425310498
Effective search space used: 22425310498
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)