BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13010 (UTR included)
(1567 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A2E08 743 0.0
BF01051B1C09 672 0.0
>BF01051A2E08
Length = 788
Score = 743 bits (375), Expect = 0.0
Identities = 443/471 (94%), Gaps = 21/471 (4%)
Strand = Plus / Plus
Query: 479 ataaagttataatcatataacgatggccgacaacgtaaatatagatattcctggcgaaat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ataaagttataatcatataacgatggccgacaacgtaaatatagatattcctggcgaaat 71
Query: 539 taacgctacaatggaaaagaagggttttcaaaagtatgtcaatgatatggagttgttact 598
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 72 taacgctacaatggaaaagaagggttttcaaaagt---------------------tact 110
Query: 599 gcagcaagttcgtagtggggctggacctgccttggtgttgggagtgctatcttcacggag 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gcagcaagttcgtagtggggctggacctgccttggtgttgggagtgctatcttcacggag 170
Query: 659 accatggtctcaatttgtagccactgacaatttcaaggctcctgtatccctgcctagatt 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 171 accatggtctcaatttgtagccactgacaatttcaaggctcctgtatccctgccaagatt 230
Query: 719 atcacgaagattctataaaaacgttgaatactttcaagccaactacttaattgtattttt 778
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atcccgaagattctataaaaacgttgaatactttcaagccaactacttaattgtattttt 290
Query: 779 gggattatttgcatactgtttaattacttccccgctactattaattgctatggtcgctag 838
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 291 gggattatttgcatactgtttaattacttccccgctactattaatcgctatggtcgctag 350
Query: 839 tttctttggatacagaaaattgacttcaggacctaacacatggaaggttatacttaataa 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tttctttggatacagaaaattgacttcaggacctaacacatggaaggttatacttaataa 410
Query: 899 ctatattgtttttttattgcatttgtcttatctaaaaagaaaattaaattg 949
|||||||| |||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 411 ctatattggttttttatagcgtttgtcttatctaaaaaaaaaattaaattg 461
>BF01051B1C09
Length = 759
Score = 672 bits (339), Expect = 0.0
Identities = 395/419 (94%), Gaps = 21/419 (5%)
Strand = Plus / Plus
Query: 466 tagcaaagtgtatataaagttataatcatataacgatggccgacaacgtaaatatagata 525
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcaaactgtatataaagttataatcatataacgatggccgacaacgtaaatatagata 60
Query: 526 ttcctggcgaaattaacgctacaatggaaaagaagggttttcaaaagtatgtcaatgata 585
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcctggcgaaattaacgctacaatggaaaagaagggttttcaaaagt------------ 108
Query: 586 tggagttgttactgcagcaagttcgtagtggggctggacctgccttggtgttgggagtgc 645
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ---------tactgcagcaagttcgtagtggggctggacctgccttggtgttgggagtgc 159
Query: 646 tatcttcacggagaccatggtctcaatttgtagccactgacaatttcaaggctcctgtat 705
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 160 tatcttcacggagaccatggtctcaatttgtagccactgacaatttcaaggctcctgtgt 219
Query: 706 ccctgcctagattatcacgaagattctataaaaacgttgaatactttcaagccaactact 765
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ccctgccaagattatcacgaagattctataaaaacgttgaatactttcaagccaactact 279
Query: 766 taattgtatttttgggattatttgcatactgtttaattacttccccgctactattaattg 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 taattgtatttttgggattatttgcatactgtttaattacttccccgctactattaattg 339
Query: 826 ctatggtcgctagtttctttggatacagaaaattgacttcaggacctaacacatggaag 884
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ctatggtcgctagtttctttggatacagaaaattgacttcaggacctaacacatggaag 398
Score = 488 bits (246), Expect = e-137
Identities = 252/254 (99%)
Strand = Plus / Plus
Query: 962 aggagctacggtgacagtggtagctttgcatgccagcttctttgatgcagaaactctgcc 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aggagctacggtgacagtggtagctttgcatgccagcttctttgatgcagaaactctgcc 565
Query: 1022 agcgtcaaacgatcctgaacagtttcctatgatcgagcaagtgtgacacttactgccaat 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agcgtcaaacgatcctgaacagtttcctatgatcgagcaagtgtgacacttactgccaat 625
Query: 1082 gtttttttgtcaacccaaactaattcagaaaaatataaaaattagctaacaataaactta 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gtttttttgtcaacccaaactaattcagaaaaatataaaaattagctaacaataaactta 685
Query: 1142 aacctaacatgtttatggttacaaaaataataacttatgttatatgtatagatcttatat 1201
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 686 aacctaacaggtttatggttacaaaaataataacttatgttatatgtatagatcttatgt 745
Query: 1202 acaaatcttggcac 1215
||||||||||||||
Sbjct: 746 acaaatcttggcac 759
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 279,758
Number of extensions: 11112
Number of successful extensions: 11112
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 11112
Number of HSP's successfully gapped: 5
Length of query: 1567
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1550
Effective length of database: 8,119,229
Effective search space: 12584804950
Effective search space used: 12584804950
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)