BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13013 (UTR included)
(1759 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_436_C1 2262 0.0
>BF14_436_C1
Length = 2355
Score = 2262 bits (1141), Expect = 0.0
Identities = 1173/1183 (99%), Gaps = 3/1183 (0%)
Strand = Plus / Plus
Query: 580 aggtgctgtcgatgagcgatgagctgcgtcgcgcgctgtactcgggcgcctcactggaca 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aggtgctgtcgatgagcgatgagctgcgtcgcgcgctgtactcgggcgcctcactggaca 123
Query: 640 tggagttctcgccgccagacctcatcggaacctccgagatattcaccatggaacaccggg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tggagttctcgccgccagacctcatcggaacctccgagatattcaccatggaacaccggg 183
Query: 700 agaagctatgcagcgtgttgcccgcccgcgcccagggttacatgtggcagctaacattca 759
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 184 agaagctatgcagcgtgttgcccgcccgcgcccaaggttacatgtggcagctcacattca 243
Query: 760 gcaccagccagcacggcttctcgctggcctctatgtataggaagatgcaacgagtcgaca 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gcaccagccagcacggcttctcgctggcctctatgtataggaagatgcaacgagtcgaca 303
Query: 820 gtcctgtgctgctcgtcatacaggacaccgataataacgtgttcggtgcgctgacgtcat 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtcctgtgctgctcgtcatacaggacaccgataataacgtgttcggtgcgctgacgtcat 363
Query: 880 gcgcgttccgtccctcggaacatttctacgggacgggcgagtcgctgctattctcattcc 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gcgcgttccgtccctcggaacatttctacgggacgggcgagtcgctgctattctcattcc 423
Query: 940 agagagaggaaaggcgtctctcacagacgaaggacgaacacaaggaggctggcgacgaaa 999
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 424 agagagaggaaaggcgtctctcacagacgaaggacgaacacaaggagactggcgacgaaa 483
Query: 1000 aggacaaggataaagatgaacaagttgtgccattaaaaaccaaattcaaatactggggct 1059
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 484 aggacaaggataaagatgaacaagttgtgccattaaaaaccaaattcaagtactggggct 543
Query: 1060 ggaccggcgacaacatgtacttcatcagaggaagcaacgataacatctccatcggcgctg 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ggaccggcgacaacatgtacttcatcagaggaagcaacgataacatctccatcggcgctg 603
Query: 1120 gagacggcaagttcggcctgtggctggacggtgacctgtacctgggccggacccagcgct 1179
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 604 gagacggcaagttcggcctgtggctggacggcgacctgtacctgggccggacccagcgct 663
Query: 1180 gcaccacctacggcaacgagccgctgaccacgcgcgaggacttcgtcgtcaagatcatgg 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gcaccacctacggcaacgagccgctgaccacgcgcgaggacttcgtcgtcaagatcatgg 723
Query: 1240 agtgctggaccttcatctgaacgcccgccaccgacgctagctttactgtcttatgaaatt 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 agtgctggaccttcatctgaacgcccgccaccgacgctagctttactgtcttatgaaatt 783
Query: 1300 tgctacgatttgacacctttacatgtcggttttaactgtacccaagatattttgtactcg 1359
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 784 tgctacgatttgacacctttacatgtcggttttgactgtacccaagatattttgtactcg 843
Query: 1360 catcgactcgagcgccctcccctcctctcttcccctttgagatggtagtctgcgcgcttt 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 catcgactcgagcgccctcccctcctctcttcccctttgagatggtagtctgcgcgcttt 903
Query: 1420 tctagtcaaacgtactgaatcccgaccactgttttaattgtccgtttagaggcgtgcggc 1479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 tctagtcaaacgtactgaatcccgaccactgttttaattgtccgtttagaggcgtgcggc 963
Query: 1480 cggagccccggcctccaccgcagcgagtgcgttgaacctagtcaattgtcgttcgtatgt 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 cggagccccggcctccaccgcagcgagtgcgttgaacctagtcaattgtcgttcgtatgt 1023
Query: 1540 aggttacggcgtaccgccggtaacgattacgtgtcaattcaattaatgcattgttgttaa 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 aggttacggcgtaccgccggtaacgattacgtgtcaattcaattaatgcattgttgttaa 1083
Query: 1600 gaaaaaaaaaataaataataaaaa---atatgtaatgattaaaatatcattgtacaacgt 1656
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1084 gaaaaaaaaaataaataataaaaaaatatttgtaatgattaaaatatcattgtacaacgt 1143
Query: 1657 tatgtagaggtttatatttaacgcaacggttttttgtgagcgacagtcttttggtgttgc 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 tatgtagaggtttatatttaacgcaacggttttttgtgagcgacagtcttttggtgttgc 1203
Query: 1717 ccacttattgacgttgacgtaatttttcattgatttcatacaa 1759
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 ccacttattgacgttgacgtaatttttcattgatttcatacaa 1246
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 177,426
Number of extensions: 3848
Number of successful extensions: 3848
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3847
Number of HSP's successfully gapped: 1
Length of query: 1759
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1742
Effective length of database: 8,119,229
Effective search space: 14143696918
Effective search space used: 14143696918
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)