BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13018 (UTR included)
(1462 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2540_C1 979 0.0
>BF14_2540_C1
Length = 1158
Score = 979 bits (494), Expect = 0.0
Identities = 524/534 (98%)
Strand = Plus / Plus
Query: 407 atatctggacaagctaccgaacacatacgtgtttaccaaacaattggcggagcacgtagt 466
|||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atatttggacaagcttccgaatacatacgtgtttaccaaacaattggcggagcacgtagt 684
Query: 467 taatgaacaaaaaggaaagctgccgatagtaatcatgagaccttctatagttatatcgag 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taatgaacaaaaaggaaagctgccgatagtaatcatgagaccttctatagttatatcgag 744
Query: 527 tgttagagagcctatggtgggttggatcgagaacctcaacgggccggttgctatattgat 586
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgttagagagcctatggtcggttggatcgagaacctcaacgggccggttgctatattgat 804
Query: 587 agcgagtggcaaaggtattcttcacacaatgtacacagaccccaacctcatctcagacta 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agcgagtggcaaaggtattcttcacacaatgtacacagaccccaacctcatctcagacta 864
Query: 647 catgccagtggacatagctataaaagctttcatagctgccgcgtgggcaagaggtaccaa 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 catgccagtggacatagctataaaagctttcatagctgccgcgtgggcaagaggtaccaa 924
Query: 707 aaagctggaaccaacagacgacatacatctgtataactgctcatcaagcgaaatcaaagc 766
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 aaaactggaaccaacagacgacatacatctgtataactgctcatcaagcgaaatcaaagc 984
Query: 767 gttgactatgggtcagatagtcgaattggggatggaaataagtaaaaagatccccttgga 826
||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||
Sbjct: 985 gttgactatgggtcagatagttgaattggggatggaaataagtaaaaagattccattgga 1044
Query: 827 ttcgttagtatggcatccctgcggaggcttaacttcatccaagctagttaattacgtaaa 886
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1045 ttcgttagtatggcatccctgcggaggcttaacttcatcaaagctagttaattacgtaaa 1104
Query: 887 ggtcctgctattacacctactaccggctctgttagttgatgggattttgaaact 940
|||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1105 ggtcctgctattacacctactaccggctttgttagttgatgggattttgaaact 1158
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 225,230
Number of extensions: 5838
Number of successful extensions: 5838
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5838
Number of HSP's successfully gapped: 1
Length of query: 1462
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1445
Effective length of database: 8,119,229
Effective search space: 11732285905
Effective search space used: 11732285905
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)