BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13036 (UTR included)
(1981 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_987_C1 2625 0.0
>BF14_987_C1
Length = 1800
Score = 2625 bits (1324), Expect = 0.0
Identities = 1383/1402 (98%), Gaps = 3/1402 (0%)
Strand = Plus / Plus
Query: 583 tttttaagcgtaccaaaatgttaaattattttcttctatttgtttgtattggtacggtgt 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 tttttaagcgtaccaaaatgttaaattattttcttctatttgtttgtattggtacggtgt 198
Query: 643 tagctcaagaacctagtttagatgatgcacttgcatccttacccccagaacttcaaggca 702
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 199 tagctcaagaacctagtttagacgatgcactcgcatccttacccccagaacttcaaggca 258
Query: 703 aagttgatgagaaccagataaatgaattaaaaaataaatcagtacaactattccagaaga 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aagttgatgagaaccagataaatgaattaaaaaataaatcagtacaactattccagaaga 318
Query: 763 aatgtgatgagaatggaggtttggatgcttttccaaaggcagagaacgcgttccaagttt 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aatgtgatgagaatggaggtttggatgcttttccaaaggcagagaacgcgttccaagttt 378
Query: 823 tcaaaaattgcatccaagatctggtaaatccagaagttttgcagaaggaaatcaaagacg 882
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcaaagattgcatccaagatctggtaaatccagaagttttgcagaaggaaatcaaagacg 438
Query: 883 ccacgccaacaggtcaagtagacgaagtgttcaagaagtactgctacaagaaaccagatt 942
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ccacgccgacaggtcaagtcgacgaagtgttcaagaagtactgctacaagaaaccagatt 498
Query: 943 tcaaaggctgcttccagaacatgactgagacgataaagccttgtttctcagttgaagaac 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tcaaaggctgcttccagaacatgactgagacgataaagccttgtttctcagttgaagaac 558
Query: 1003 aaaagaatctcaaaactatatacaacatctcggaacaattggcggagtttatatgtttca 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaaagaatctcaaaactatatacaacatctcggaacaattggcggagtttatatgtttca 618
Query: 1063 aggacggtgatagaatcgcattgttcatctcagaaaatggtccggaatgtataactgaga 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aggacggtgatagaatcgcattgttcatctcagaaaatggtccggaatgtataactgaga 678
Query: 1123 aacaggaagcgatcgaggagtgcttcaacaagacgctaggcgctgacttgaaaatacacc 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aacaggaagcgatcgaggagtgcttcaacaagacgctaggcgctgacttgaaaatacacc 738
Query: 1183 aagaaaacttctccatagacaacctgccgaagatacagtttacggacaaagagtgcggcc 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aagaaaacttctccatagacaacctgccgaagatacagtttacggacaaagagtgcggcc 798
Query: 1243 aattcgctgatcttcaaaagtgcgtggtgtcgtccttggagtcgtgtgaggcgccaacgt 1302
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 799 aattcgctgatcttcaaaagtgcgtggtgtcgtccttagagtcgtgtgaggcgccaacgt 858
Query: 1303 ctgccaacatcatggaatcgctgttcaagttcgctagaaaagcaaccccatgcaaggaat 1362
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 859 ctgccaacatcatggaatcgctgttcaagttcgcgagaaaagcaaccccatgcaaggaat 918
Query: 1363 taccggaaaacgacagcacggctagaggtcaaaaaggagaaaagggcttcaattcagcga 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 taccggaaaacgacagcacggctagaggtcaaaaaggagaaaagggcttcaattcagcga 978
Query: 1423 acacattaactgtgagatcctttgccatggttgcaatactattctctttaatcatataag 1482
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 acacgttaactgtgagatcctttgccatggttgcaatactattctctttaatcatataag 1038
Query: 1483 tctttccaacacataaccctggtacgatttcatatttgtttatatatttttcaagaattt 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 tctttccaacacataaccctggtacgatttcatatttgtttatatatttttcaagaattt 1098
Query: 1543 tgccataattcattaacttttaatttattaaaaaaaaaaacttcacgaaaaatatttaag 1602
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1099 tgccataattcattaacttttaatttattaaaaaaaaaaaaatcacgaaaaatatttaag 1158
Query: 1603 ---acattccttttttaaaattttagaatgccttattggtttaaaacaaaaacgggcaaa 1659
||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 1159 acaacattccttttttaaaattttagaacgcctcattggtttaaaacaaaaacgggcaaa 1218
Query: 1660 attcacctacgtagtagttctaaataacaattagctggtattgtagtgtatgattccaaa 1719
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1219 attcacctacgtagtagttctaaataacaattagccggtattgtagtgtatgattccaaa 1278
Query: 1720 acaaattaccaaataaattcaccttatatagataaatatatgtaaagccaataaataatt 1779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 acaaattaccaaataaattcaccttatatagataaatatatgtaaagccaataaataatt 1338
Query: 1780 agccaaaacatttgcttccatccgtactgaaagtgctatatttacaggccatataggtgt 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 agccaaaacatttgcttccatccgtactgaaagtgctatatttacaggccatataggtgt 1398
Query: 1840 tatttttgtatagatttattgtaagcttaaaataatttatgactggcttcatggtactat 1899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 tatttttgtatagatttattgtaagcttaaaataatttatgactggcttcatggtactat 1458
Query: 1900 tagaattagcagatttatataacaggtcacatattcagcttgttgttcttagtgccaatg 1959
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1459 taggattagcagatttatataacaggtcacataatcagcttgttgttcttagtgccaatg 1518
Query: 1960 tttaatagtaataaattttata 1981
||||||||||||| ||||||||
Sbjct: 1519 tttaatagtaatagattttata 1540
Score = 103 bits (52), Expect = 1e-21
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 527 ttctggttttatagatttcttgcttaaagtcaaagcaagcgtcgaacaaagaacac 582
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ttctggttttatagatttcttgcttaaagtcgaagcaagcgtcgaacaaagaacac 56
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 360,689
Number of extensions: 17929
Number of successful extensions: 17929
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 17928
Number of HSP's successfully gapped: 2
Length of query: 1981
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1964
Effective length of database: 8,119,229
Effective search space: 15946165756
Effective search space used: 15946165756
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)