BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13045 (UTR included)
(2692 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027B1F10 1144 0.0
>BF01027B1F10
Length = 686
Score = 1144 bits (577), Expect = 0.0
Identities = 606/615 (98%), Gaps = 3/615 (0%)
Strand = Plus / Plus
Query: 2081 gccatgtttcgagcctcgtaactccattcggccgacgctagtcgacgctaaacccggcaa 2140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 gccatgtttcgagcctcgtaactccattcggccgacgctagtcgacgctaaacccggcaa 100
Query: 2141 ggaagagaaaaggaatttgatatcgaacatggagcaggaagatatatactgagacgtact 2200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ggaagagaaaaggaatttgatatcgaacatggagcaggaagatatatactgagacgtact 160
Query: 2201 tatgtactgtttggtgatgagtccaaaggttaattgtgatattcgatttaggggcgcggc 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tatgtactgtttggtgatgagtccaaaggttaattgtgatattcgatttaggggcgcggc 220
Query: 2261 agctattttaacttttgttataatttgtcgtagggttgttgctcgttggttattcgcggt 2320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 agctattttaacttttgttataatttgtcgtagggttgttgctcgttggttattcgcggt 280
Query: 2321 gttgccatttgaaatatcggtagtgtatacacagccttagaacaatcctaatatagtaga 2380
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gttgccattggaaatatcggtagtgtatacacagccttagaacaatcctaatatagtaga 340
Query: 2381 ctgttatttgttaatattacattcaaagactaaagttcccatag---tttttttttacta 2437
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 341 ctgttatttgttaatattacattcaaagactaaagttcccatagttttttttttttacta 400
Query: 2438 ataataaaagtgtacacgagtccaaaatattagatttaagatctttgtaagttttcaata 2497
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 401 ataataaaagtgtacacgagtccaaaacattagatttaagatctttgtaagttttcaata 460
Query: 2498 actgccttttcactgagacatatgattgagttactttttcctcgtttccattacttttta 2557
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 461 actgccttttcactgagacatatgattgagttactttttcctcgtttccattacatttta 520
Query: 2558 tttaaagacaataatagcaattgaattgataatttttgatttattttgtgaacagtttat 2617
|||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||
Sbjct: 521 tttaaagacaataatagcgattgaattgataattttttatttattttgtgaatagtttat 580
Query: 2618 ttctataataagctcaaaattattttatttcgtacttagtacattgattaaaattaaatt 2677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttctataataagctcaaaattattttatttcgtacttagtacattgattaaaattaaatt 640
Query: 2678 tattattaatatttt 2692
|||||||||||||||
Sbjct: 641 tattattaatatttt 655
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 301,450
Number of extensions: 5443
Number of successful extensions: 5443
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5442
Number of HSP's successfully gapped: 1
Length of query: 2692
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2675
Effective length of database: 8,119,229
Effective search space: 21718937575
Effective search space used: 21718937575
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)