BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13074 (UTR included)
(2152 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A2H02 1491 0.0
>BF01009A2H02
Length = 795
Score = 1491 bits (752), Expect = 0.0
Identities = 784/795 (98%)
Strand = Plus / Plus
Query: 1241 gaatcaggctctttatttaataggttgcgttggtgatgaagttatatacttagatccaca 1300
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 1 gaatcaggctctttatttaataggctgcgttncggatgaagttatatacttagatccaca 60
Query: 1301 tacaacacagaaatctggattagtggagaacaaacttacagatgaacaaaaagaaatgga 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacaacacagaaatctggattagtggagaacaaacttacagatgaacaaaaagaaatgga 120
Query: 1361 ctgtacatatcactgtaagtatgcttcaagaattccaatattgtctatggatccctctgt 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgtacatatcactgtaagtatgcttcaagaattccaatattgtctatggatccctctgt 180
Query: 1421 ggcagtgtgttttctttgtcgcacaagaagtgattttgatgaactatgtgaattaattga 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcagtgtgttttctttgtcgcacaagaagtgattttgatgaactatgtgaattaattga 240
Query: 1481 gaaaagattaatgcaagagagtcaaccattgtttgaaatatgtgagaaaagaccatcaca 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaaagattaatgcaagagagtcaaccattgtttgaaatatgtgagaaaagaccatcaca 300
Query: 1541 ttggggccccaatacaaacgacattgatttacagaacactaatctattcacagaatttga 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttggggccccaatacaaacgacattgatttacagaacactaatctattcacagaatttga 360
Query: 1601 agaagttgacagacaatttgatgattctgacattgaatttgaaattctatgaaacttcca 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaagttgacagacaatttgatgattctgacattgaatttgaaattctatgaaacttcca 420
Query: 1661 gcgatattgaaggctactggagagtacatgataactggcatcacaacaatatttttaaat 1720
|||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgaaattgaaatctaccggagagtacatgataactggcatcacaacaatatttttaaat 480
Query: 1721 ttagtataaatgaaacaatttttagcaaatgaaataatttcacttgcttcttattactat 1780
||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 481 ttagtataaatgaaaaaatttttagcaaatgaagtaatttcacttgcttgttattactat 540
Query: 1781 gcaaatttcaatttaatgtttgttcttatataaatgggcttatgagcttttgctgtcaag 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcaaatttcaatttaatgtttgttcttatataaatgggcttatgagcttttgctgtcaag 600
Query: 1841 taacatttaatttatctagtgtcctgagaattaacattatataacttaatgcacagctat 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taacatttaatttatctagtgtcctgagaattaacattatataacttaatgcacagctat 660
Query: 1901 ttgtgaagcagttctgatttacagtgcctttactaataatatatgaattcagaattaatg 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgtgaagcagttctgatttacagtgcctttactaataatatatgaattcagaattaatg 720
Query: 1961 gtaacagtaaaggtcctttatgatcattgattttatacataaaattgccaaatctagtca 2020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtaacagtaaaggtcctttatgatcattgattttatacataaaattgccaaatctagtca 780
Query: 2021 catattatatatagc 2035
|||||||||||||||
Sbjct: 781 catattatatatagc 795
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 274,397
Number of extensions: 5458
Number of successful extensions: 5458
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5458
Number of HSP's successfully gapped: 1
Length of query: 2152
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2135
Effective length of database: 8,119,229
Effective search space: 17334553915
Effective search space used: 17334553915
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)