BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13075 (UTR included)
(2140 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2276_C1 1564 0.0
BF01020A1H08 1074 0.0
>BF14_2276_C1
Length = 793
Score = 1564 bits (789), Expect = 0.0
Identities = 792/793 (99%)
Strand = Plus / Plus
Query: 413 ctcgcgaccgagcgtagataaagccgataaaatcactagttactagttaacaatacgaaa 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcgcgaccgagcgtagataaagccgataaaatcactagttactagttaacaatacgaaa 60
Query: 473 catgaagtcgttttgttggatagccttaatggtggtggctgtgtgtggtgaagagacacg 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgaagtcgttttgttggatagccttaatggtggtggctgtgtgtggtgaagagacacg 120
Query: 533 tcagaatccgtctgtagttggtcgtatacgaaacaatggtgcgctgaatgaagacgccga 592
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 tcagaatccgtctgtagttggtcgtatacgaaacaatggtgcactgaatgaagacgccga 180
Query: 593 aaacaccgaattagttcaggctttcgtggttttccgtcacggcgataggaccccagatga 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaacaccgaattagttcaggctttcgtggttttccgtcacggcgataggaccccagatga 240
Query: 653 ggctgagatagaaaagtatcccgctgatgttaaaaataatgacattttctttccttatgg 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggctgagatagaaaagtatcccgctgatgttaaaaataatgacattttctttccttatgg 300
Query: 713 aactaaagcattgactaataaagggaagcagcgaggatatctcgtaggagagtatctcag 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aactaaagcattgactaataaagggaagcagcgaggatatctcgtaggagagtatctcag 360
Query: 773 aaaacgctacgataacttcatatcccgcttatatctgccggacgagatttcaatacgaac 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaacgctacgataacttcatatcccgcttatatctgccggacgagatttcaatacgaac 420
Query: 833 gacatcctttgcacggactaagatgacggcgttgactgctctggccgcactatatatacc 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacatcctttgcacggactaagatgacggcgttgactgctctggccgcactatatatacc 480
Query: 893 tccaccagctcagaaatggaaccccttccttaattggcagcctgttccatatgacaccat 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccaccagctcagaaatggaaccccttccttaattggcagcctgttccatatgacaccat 540
Query: 953 ggcggcggaagacgacgacttaatgtattactacaattgcccacgttatctaaaactgaa 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggcggcggaagacgacgacttaatgtattactacaattgcccacgttatctaaaactgaa 600
Query: 1013 agatgctgtcaacgattacccagagttccaaccaaaggtgaaatcctacgaaggactatt 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agatgctgtcaacgattacccagagttccaaccaaaggtgaaatcctacgaaggactatt 660
Query: 1073 taattttataagttcacaaactggaactaatatcacaactcctgatgacgttttcttcct 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 taattttataagttcacaaactggaactaatatcacaactcctgatgacgttttcttcct 720
Query: 1133 agataatctctttcaaacgttggagaacgttggcgtgagccctccaaattgggcacaaaa 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agataatctctttcaaacgttggagaacgttggcgtgagccctccaaattgggcacaaaa 780
Query: 1193 ggtgatgccgaaa 1205
|||||||||||||
Sbjct: 781 ggtgatgccgaaa 793
>BF01020A1H08
Length = 596
Score = 1074 bits (542), Expect = 0.0
Identities = 548/550 (99%)
Strand = Plus / Plus
Query: 1213 aagtaacaaaattagaatacgccatagaattttatacaagtgaggagatacgattagcct 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtaacaaaattagaatacgccatagaattttatacaagtgaggagatacgattagcct 60
Query: 1273 caggagtccttctgatggatatactgaacgcgacgagctccgttatagcaggtgataagg 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caggagtccttctgatggatatactgaacgcgacgagctccgttatagcaggtgataagg 120
Query: 1333 atcgcccgaaattatatttaatatcagctcatgaaaacaatgtagccggactcatggccg 1392
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 atcgcccgaaactatatttaatatcagctcatgaaaacaacgtagccggactcatggccg 180
Query: 1393 ccataagggtctttaaacctcatcagccccgatatggagcaaccatatcgcttgaattga 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccataagggtctttaaacctcatcagccccgatatggagcaaccatatcgcttgaattga 240
Query: 1453 ggaggcgaccatcgacgggacagtacggatttatggctgtgtatgctggaaatgctggcg 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaggcgaccatcgacgggacagtacggatttatggctgtgtatgctggaaatgctggcg 300
Query: 1513 gtccgggagagattttgcctatcgctggctgcgggggacaaactttctgcgactataaca 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtccgggagagattttgcctatcgctggctgcgggggacaaactttctgcgactataaca 360
Query: 1573 cctttatacaactgacaagagataatgttttgccgagaagtgaattaaaaactctgtgtt 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctttatacaactgacaagagataatgttttgccgagaagtgaattaaaaactctgtgtt 420
Query: 1633 atagttaataagaaacaatttagtaattttttattttattccgtcaaagacaactgatat 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atagttaataagaaacaatttagtaattttttattttattccgtcaaagacaactgatat 480
Query: 1693 cttatgtacgttttagtctataaatattaaaatggttacgtcataagacattaaaatgtt 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttatgtacgttttagtctataaatattaaaatggttacgtcataagacattaaaatgtt 540
Query: 1753 ttttatatta 1762
||||||||||
Sbjct: 541 ttttatatta 550
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,653
Number of extensions: 6664
Number of successful extensions: 6664
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6664
Number of HSP's successfully gapped: 2
Length of query: 2140
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2123
Effective length of database: 8,119,229
Effective search space: 17237123167
Effective search space used: 17237123167
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)